Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq47 102 1e-19 >seq47 Length=279382 Score = 102 bits (112), Expect = 1e-19 Identities = 187/283 (66%), Gaps = 52/283 (18%) Strand=Plus/Plus Query 13 GGATGCCTTGGCGATTACAGGCGATGAAGGACGTAGTAGCTTGCGATAAGCTGCGGGGAG 72 |||||||||||| | | |||||||||||||||| | | ||||||||| ||||||| Sbjct 80265 GGATGCCTTGGCATTGAGAGGCGATGAAGGACGTGGCACGCTGCGATAAGAGCCGGGGAG 80324 Query 73 TGAGCAAACACACTTTGATCCGCAGATTTCCGAATGGGGAAACCC--------GGCC--- 121 | || | ||| |||||||||| || ||||||||||||||||| || | Sbjct 80325 -GCGCGAGCACCCTTTGATCCGGCTATCTCCGAATGGGGAAACCCACCTTTACGGTCACC 80383 Query 122 --------CTTTGGGTC------------ATTGCATG--------------------CTG 141 ||||| || |||| ||| ||| Sbjct 80384 CAACTTAGCTTTGCTTCGGCAAGGCGAAGATTGGATGGTCGGAAGAGGTATAATGATCTG 80443 Query 142 AATACATAGGTATGCAAAGCGAACGCGGCGAACTGAAACATCTAAGTAGCTGCAGGAAAA 201 |||||||||| |||| ||| | | |||||||||||||| |||| ||| |||||| Sbjct 80444 AATACATAGGGTCATTAAGCAAACCCAGGGAACTGAAACATCTCAGTACCTGGAGGAAAG 80503 Query 202 GAAATCAACCGAGATTCCCAAAGTAGTGGCGAGCGAAATGGGA 244 || ||||||||||| |||| |||||||||||||||| |||| Sbjct 80504 GACATCAACCGAGACTCCCGTAGTAGTGGCGAGCGAACCGGGA 80546 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918382706528