Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= AAMG01002223.1 Length=366 Score E Sequences producing significant alignments: (Bits) Value seq47 183 6e-44 >seq47 Length=279382 Score = 183 bits (202), Expect = 6e-44 Identities = 160/198 (81%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 82 AAAGAAGTTTACAATCCGTAGAACCTTCATCCTTCACGCTACTTGGCTGGTTCAGACTCT 141 |||||| |||||||||| ||| |||||||| ||||||| | |||||| |||| || | Sbjct 78527 AAAGAATTTTACAATCCTAAGA-CCTTCATCATTCACGCGGCATGGCTGCGTCAGGCTTT 78469 Query 142 CGTCCATTGACCAATATTCCTCACTGCTGCCTCCCGTAGGAGTTTGGACCGTGTCTCAGT 201 || |||||| ||| ||||| |||||||||||||||||||||||||| |||||||||||| Sbjct 78468 CGCCCATTGCGCAAGATTCCCCACTGCTGCCTCCCGTAGGAGTTTGGGCCGTGTCTCAGT 78409 Query 202 TCCAATGTGGGGGACCTTCCTCTCAGAACCCCTATCCATCGTAGGCTAGGTGGGCCGTTA 261 ||||||||| || | |||||||||| | ||| ||||| | || |||| ||| ||| Sbjct 78408 CCCAATGTGGCTGATCATCCTCTCAGACCAGCTACTGATCGTCGCCTTGGTGAGCCTTTA 78349 Query 262 CCCCGCCTACTACCTAAT 279 || | || |||| ||||| Sbjct 78348 CCTCACCAACTAGCTAAT 78331 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1068779874496