Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= AAMG01002236.1 Length=287 Score E Sequences producing significant alignments: (Bits) Value seq51 75.2 2e-11 seq48 75.2 2e-11 >seq51 Length=275480 Score = 75.2 bits (82), Expect = 2e-11 Identities = 89/118 (75%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||| ||||| || |||| ||||||| ||||| | |||| || ||| Sbjct 33498 GTAAGAGAGAAACCGTTGA-TTCATGG-AATTGGTAAATGCGGTTAGCTGAAAAGCTAGT 33441 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | | | ||||| ||||||| |||| ||||||||||||||| || | ||||||||||| Sbjct 33440 GTCACCAAGCTGCCATCTGTAGGATGATGGCTGAACGCCTCAAACTTAGAATCCATGC 33383 Score = 75.2 bits (82), Expect = 2e-11 Identities = 89/118 (75%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||| ||||| || |||| ||||||| ||||| | |||| || ||| Sbjct 51654 GTAAGAGAGAAACCGTTGA-TTCATGG-AATTGGTAAATGCGGTTAGCTGAAAAGCTAGT 51597 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | | | ||||| ||||||| |||| ||||||||||||||| || | ||||||||||| Sbjct 51596 GTCACCAAGCTGCCATCTGTAGGATGATGGCTGAACGCCTCAAACTTAGAATCCATGC 51539 >seq48 Length=277641 Score = 75.2 bits (82), Expect = 2e-11 Identities = 89/118 (75%), Gaps = 2/118 (2%) Strand=Plus/Minus Query 1 GTACGAGAGGAACCGCGGAATTCAGAATAATTGGTTTTTGCGGCTGTCTGACCAGGCAGT 60 ||| ||||| ||||| || |||| ||||||| ||||| | |||| || ||| Sbjct 257033 GTAAGAGAGAAACCGTTGA-TTCATGG-AATTGGTAAATGCGGTTAGCTGAAAAGCTAGT 256976 Query 61 GCCGCGAAGCTACCATCTGCTGGATTATGGCTGAACGCCTCTAAGTCAGAATCCATGC 118 | | | ||||| ||||||| |||| ||||||||||||||| || | ||||||||||| Sbjct 256975 GTCACCAAGCTGCCATCTGTAGGATGATGGCTGAACGCCTCAAACTTAGAATCCATGC 256918 Score = 73.4 bits (80), Expect = 6e-11 Identities = 70/90 (78%), Gaps = 0/90 (0%) Strand=Plus/Minus Query 29 AATTGGTTTTTGCGGCTGTCTGACCAGGCAGTGCCGCGAAGCTACCATCTGCTGGATTAT 88 |||||||| ||||| | |||| || |||||| | ||||| ||||||| |||| || Sbjct 244880 AATTGGTTACTGCGGTTAGCTGAAAAGCTAGTGCCACCAAGCTGCCATCTGTAGGATGAT 244821 Query 89 GGCTGAACGCCTCTAAGTCAGAATCCATGC 118 ||||||||||||| | ||||||| |||| Sbjct 244820 GGCTGAACGCCTCAACATCAGAATTTATGC 244791 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 819185056512