Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001695595.1_202016-07-27] 1,883 sequences; 74,737,153 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq117 86.0 2e-11 >seq117 Length=192600 Score = 86.0 bits (94), Expect = 2e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 ||||||||||| ||||| | | ||||| | || ||||| || ||||| || | Sbjct 166871 GTCATACGAGACGGAATCGCATGCGGGTTCACGACAATGTCCGGGGTAATGCCTTCGACA 166930 Query 364490 GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548 ||||| ||||| ||||| || || ||| | | ||||| || ||||||||| ||| || Sbjct 166931 GTAAACGGCATGTCTTCTTGACGGTACG-TCATGCCAATCGTCCCCTTTTGCCCATGCCG 166989 Query 364549 AGAAGCAAACTTGTCGCCAAT 364569 |||||||||||||| ||||| Sbjct 166990 CGAAGCAAACTTGTCCCCAAT 167010 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884840925348519