Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01000056.1 Length=332 Score E Sequences producing significant alignments: (Bits) Value seq1490 77.0 6e-12 >seq1490 Length=214893 Score = 77.0 bits (84), Expect = 6e-12 Identities = 115/161 (71%), Gaps = 3/161 (2%) Strand=Plus/Minus Query 173 CTCCTGCGTCCCCACGTCACCCTCAAATGTAGTAACGGAATACTAACC-GTTTCTGCCAT 231 || || ||||||||| || | |||| ||| |||||| ||||| ||||| |||| Sbjct 78196 CTTCTCCGTCCCCACATCGCATTCAATAAAGGTACAGGAATATTAACCTGTTTC--CCAT 78139 Query 232 CGGTCTCGCCGTTCGGCTGAACCTTATGACCCGACTTACCCTGATCCGATTAGCGGTGAT 291 | | ||| || || |||||| | |||||| |||||| ||||| | || || Sbjct 78138 CAGCTACGCATCTCTGCCTCACCTTAGGGGCCGACTCACCCTGCGCCGATGAACGTTGCG 78079 Query 292 CAGGAAACCTTAGTCTTTCGGCGAGGGGGTTTCCCACCCCC 332 ||||||||||| | ||||||||||||| | || ||| ||| Sbjct 78078 CAGGAAACCTTGGGCTTTCGGCGAGGGAGCTTTTCACTCCC 78038 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 959979216000