Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01000345.1 Length=193 Score E Sequences producing significant alignments: (Bits) Value seq1490 107 2e-21 >seq1490 Length=214893 Score = 107 bits (118), Expect = 2e-21 Identities = 131/178 (74%), Gaps = 3/178 (2%) Strand=Plus/Minus Query 5 CTGAAGCTTAGAAGCTTTTCTTGGAAGCATGGCATCAACCACTTCGTCATCTAAAAGATA 64 ||| ||||||| ||||||||||||||||||| ||||| |||||| | | || || Sbjct 78348 CTGGAGCTTAGTGGCTTTTCTTGGAAGCATGGTATCAATCACTTCAGTACCGAAG---TA 78292 Query 65 ACTCGTCATCAGCTCCCGGCCTTAGAATCCCGGATTTACCTAAGATTCCAGCCTACCACC 124 |||||||||| || | | ||| |||||||||| ||||||| | ||||| | Sbjct 78291 CCTCGTCATCACATCTCAGTATTAACCTCCCGGATTTGCCTAAGAGATCTACCTACTTGC 78232 Query 125 TTAAACTTGGACAACCAACGCCAAGCTGGCCTAGCCTTCTCCGTCCCTCCATCGCATT 182 |||||| |||||||| |||| |||| ||||||||||||| ||||||||| Sbjct 78231 TTAAACCGTAACAACCAATCTACGGCTGACCTAACCTTCTCCGTCCCCACATCGCATT 78174 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518389127370