Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01000750.1 Length=102 Score E Sequences producing significant alignments: (Bits) Value seq1731 87.8 8e-16 seq1732 77.0 1e-12 seq453 75.2 5e-12 >seq1731 Length=8278 Score = 87.8 bits (96), Expect = 8e-16 Identities = 54/58 (93%), Gaps = 0/58 (0%) Strand=Plus/Plus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAG 58 ||||||||||||||| ||||||||||||||||||||||||||| ||||||||| ||| Sbjct 4228 GGAAAAGAAACTAACTAGGATTCCCTCAGTAACGGCGAGTGAAGCGGGAAGAGCTCAG 4285 >seq1732 Length=9078 Score = 77.0 bits (84), Expect = 1e-12 Identities = 51/57 (89%), Gaps = 0/57 (0%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCA 57 ||||||||||||||| ||||||||| |||||||||||||||| ||||||||| || Sbjct 7098 GGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGTGAAGCGGGAAGAGCTCA 7042 >seq453 Length=12031 Score = 75.2 bits (82), Expect = 5e-12 Identities = 58/68 (85%), Gaps = 1/68 (1%) Strand=Plus/Minus Query 1 GGAAAAGAAACTAACCAGGATTCCCTCAGTAACGGCGAGTGAACAGGGAAGAGCCCAGCG 60 ||||||||||||||| ||||||| || |||||| ||||||||| || ||| |||||| | Sbjct 1128 GGAAAAGAAACTAACAAGGATTCGCTTAGTAACTGCGAGTGAAGAGCGAACAGCCCATC- 1070 Query 61 CCGAATCC 68 | |||||| Sbjct 1069 CTGAATCC 1062 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 230395323600