Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01001187.1 Length=261 Score E Sequences producing significant alignments: (Bits) Value seq334 89.7 8e-16 >seq334 Length=142064 Score = 89.7 bits (98), Expect = 8e-16 Identities = 97/126 (77%), Gaps = 2/126 (2%) Strand=Plus/Plus Query 20 GCGACGCTTGAGCTTTGCCCAGGTACTGCATGCGCGCGACGATTTCCTGGCCGGTGTAGC 79 ||| ||||||| | | ||| ||||||| |||||||||||| ||||| || | ||||| Sbjct 119607 GCGGCGCTTGATCGT-GCCGCGGTACTGGCTGCGCGCGACGACCTCCTGACCCGGGTAGC 119665 Query 80 AGCCTTTCTTGAAGCTGAC-GCCGCCGACGGCCTGCAGGTTGAGCATTTGCGGGATGAAC 138 |||| |||| |||| | | ||||||| || |||||||||||| ||||| | |||| Sbjct 119666 AGCCCTTCTGGAAGTTCCCACCCGCCGATCAACTCCAGGTTGAGCATCTGCGGCACGAAC 119725 Query 139 AGCTCG 144 ||||| Sbjct 119726 TGCTCG 119731 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 735984563550