Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01001307.1 Length=477 Score E Sequences producing significant alignments: (Bits) Value seq1880 129 2e-27 >seq1880 Length=148611 Score = 129 bits (142), Expect = 2e-27 Identities = 179/254 (70%), Gaps = 0/254 (0%) Strand=Plus/Plus Query 105 CCGGTGGTGTTGGTCGGCCACTCCTATGGCGGCAACGTTATCAGTGACGCGGCCAACGAT 164 |||||||| ||||||| ||||| ||||||||| || ||||| |||| ||| | Sbjct 65615 CCGGTGGTCCTGGTCGGGCACTCGTATGGCGGCTCGGTCATCAGCAACGCCGCCGTGGGC 65674 Query 165 CATGCAAACGTCAAAGCCCTGGTTTACGTCAGTGCGTTTGCACCTGAGGCCGGGGAAACC 224 | | ||| || || ||||| ||||| || || || || ||| || || || Sbjct 65675 AACACCCGCGTGAAGGCGCTGGTGTACGTGTCGGCCTTCGCGCCGGAGCAGGGCGAGTCC 65734 Query 225 GTCGCCGGGCTGGCCGGCAAATTCCCGGGCAGTACGCTGGGCCCAACGCTGGCTGCGCCT 284 |||| || | |||||||||| ||||| ||| | ||||||||| ||||||| ||||| Sbjct 65735 GTCGTCGAGTTGGCCGGCAAGTTCCCCGGCGGCACGCTGGGCGAGGCGCTGGCCGCGCCG 65794 Query 285 GTACCGCTGGCCGATGGGGGCAAGGACTNnnnnnnnnNGCAGGACAAGTTTCACAACCAG 344 || |||||| |||| || ||| |||| ||||||||||| | ||| ||| Sbjct 65795 GTGCCGCTGCCCGAGGGCGGCGTGGACCTGTACATCGACCAGGACAAGTTCCGCAAGCAG 65854 Query 345 TTCGCCGCTGACGT 358 |||||||| ||||| Sbjct 65855 TTCGCCGCCGACGT 65868 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1423969170400