Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01001377.1 Length=151 Score E Sequences producing significant alignments: (Bits) Value seq1390 82.4 6e-14 >seq1390 Length=268060 Score = 82.4 bits (90), Expect = 6e-14 Identities = 92/122 (75%), Gaps = 6/122 (5%) Strand=Plus/Minus Query 33 CGCGCCCAGGTCGGCACTGACAACGTATTG---CTTGGCCTGTCCGGCGGCGTTGACTCC 89 |||| |||||||| |||| | | | || || |||||||| || || |||||||| Sbjct 241831 CGCGAGCAGGTCGG---TGACGAGGAAGTGATCCTGGGCCTGTCGGGGGGGGTTGACTCG 241775 Query 90 TCGGTTGTAGCGGCACTGCTGCACAAGGCCATCGGCGACCAACTGACCTGCGTGTTTGTC 149 ||||| | ||||| ||| | || || ||||||||||| |||||||||||||| ||| Sbjct 241774 TCGGTGGCGGCGGCGCTGATCCATCGCGCGATCGGCGACCAGCTGACCTGCGTGTTCGTC 241715 Query 150 GA 151 || Sbjct 241714 GA 241713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 383991946200