Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01001449.1 Length=395 Score E Sequences producing significant alignments: (Bits) Value seq2 268 2e-69 >seq2 Length=153960 Score = 268 bits (296), Expect = 2e-69 Identities = 296/392 (76%), Gaps = 2/392 (1%) Strand=Plus/Plus Query 5 GGCACCGGCACGGTGTGGAAGGGCGGCCTGTTCCCGTTCCTGTTCATCACCATTGCCTGT 64 |||| |||| |||||||| |||| |||||||||||||||||||||||| || ||||| Sbjct 18518 GGCAACGGCCCGGTGTGGTCGGGCAACCTGTTCCCGTTCCTGTTCATCACGATCGCCTGC 18577 Query 65 GGCGCGGTCTCGGGTTTCCATGCGCTGATCTCCTCGGGCACCACGCCCAAGTTGCTCGCC 124 |||||||| ||||| ||||| ||| ||||| ||||||||| ||||||||| |||| | | Sbjct 18578 GGCGCGGTGTCGGGCTTCCACGCGTTGATCAGCTCGGGCACGACGCCCAAGATGCTGGAC 18637 Query 125 AGTGAGAGCCATGCCCGTTACATCGGTTACGGCGGCATGCTGATGGAGTCGTTCGTGGCC 184 | ||| | | || || | |||||||||||||||||||||| || ||||||||||| Sbjct 18638 AACGAGGTCAACGCGCGCTTCATCGGTTACGGCGGCATGCTGGCCGAATCGTTCGTGGCG 18697 Query 185 ATCATGGCGATGGTTGCCGCCTCGGTGATTGAGCCCGGCGTGTACTTCGCCATGAACAGC 244 | |||||| |||| || |||||| || ||||| |||||||||||||| ||||||||| Sbjct 18698 GTGATGGCGCTGGTGGCGGCCTCGTGCATCGAGCCGGGCGTGTACTTCGCGATGAACAGC 18757 Query 245 CCGGCTGCCATTGTCGGCACCGACG-TGGTCACCGTGGCGCAAACCGTCAGCAGTTGGGG 303 ||||| || | || |||| | ||| | || |||||| || | | ||||| Sbjct 18758 CCGGCCGCGCTGGTGGGCAAC-ACGCCCGAGACGGTGGCGGCGACGCTGTCGACCTGGGG 18816 Query 304 CTTTGCCATTACGCCTGAGGCGCTGTCGGCCGTTGCCCACAATATCGGTGAAACCACCAT 363 ||| | || ||||| || |||| | ||| | | |||| || | |||||| Sbjct 18817 CTTCGTGATCACGCCGGACATGCTGGTGCAGACCGCCAAGGACGTCGGCGAGAACACCAT 18876 Query 364 CCTGGCACGTGCCGGCGGCGCGCCGACTCTGG 395 |||||| || ||||||||||| ||||| |||| Sbjct 18877 CCTGGCGCGCGCCGGCGGCGCACCGACGCTGG 18908 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1161574851360