Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01001634.1 Length=217 Score E Sequences producing significant alignments: (Bits) Value seq151 156 5e-36 seq1732 111 2e-22 seq1731 111 2e-22 seq453 77.0 4e-12 >seq151 Length=6618 Score = 156 bits (172), Expect = 5e-36 Identities = 105/116 (91%), Gaps = 1/116 (1%) Strand=Plus/Minus Query 5 TCTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTC 64 |||||||||||||||||||| ||||||||||||||| ||||||||||||||| ||||| Sbjct 5223 TCTAGAAACCAACAAAATAGAACCGCACGTCCTATTCTGTTATTCCATGCTAATATATTC 5164 Query 65 GGGCGTA-AGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAGTCCTGGTTCC 119 |||| || |||||||||||||||||||||||| |||| |||| |||||||||||| Sbjct 5163 GGGCCTATGGCCTGCTTTGAACACTCTAATTTTTTCAAAGTAATAGTCCTGGTTCC 5108 >seq1732 Length=9078 Score = 111 bits (122), Expect = 2e-22 Identities = 89/105 (85%), Gaps = 2/105 (2%) Strand=Plus/Plus Query 6 CTAGAAACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG 65 ||||||||||||||||||| || | |||||| ||||||||||||||||||||||| Sbjct 324 CTAGAAACCAACAAAATAGAACCGAA-GTCCTAAATTATTATTCCATGCTAATGTATTCA 382 Query 66 G-GCGTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAAAG 109 || ||||||||||| |||||||||||||| |||| ||||||| Sbjct 383 TAGCAAAAGCCTGCTTTAAACACTCTAATTTTTTCAAAGTAAAAG 427 >seq1731 Length=8278 Score = 111 bits (122), Expect = 2e-22 Identities = 85/99 (86%), Gaps = 4/99 (4%) Strand=Plus/Minus Query 11 AACCAACAAAATAGGGACGCACGTCCTATTCTATTATTCCATGCTAATGTATTCG--GGC 68 |||||||||||||| || | ||||||| ||||||||||||||||||||||| ||| Sbjct 2480 AACCAACAAAATAG--ACCAAGGTCCTATCTTATTATTCCATGCTAATGTATTCAACGGC 2423 Query 69 GTAAGCCTGCTTTGAACACTCTAATTTTCTCAAGGTAAA 107 ||||||||||||||||||||||| ||| |||| ||||| Sbjct 2422 GTAAGCCTGCTTTGAACACTCTATTTTGCTCACAGTAAA 2384 >seq453 Length=12031 Score = 77.0 bits (84), Expect = 4e-12 Identities = 65/78 (83%), Gaps = 3/78 (4%) Strand=Plus/Plus Query 33 GTCCTATTCTATTATTCCATGCTAATGTATTCG-GGCGT--AAGCCTGCTTTGAACACTC 89 ||| ||||| ||||| ||||||||| ||||| ||| | ||||||||||||||||| | Sbjct 4926 GTCGTATTCCATTATCCCATGCTAAACTATTCAAGGCTTTAAAGCCTGCTTTGAACACCC 4985 Query 90 TAATTTTCTCAAGGTAAA 107 |||||| |||||||||| Sbjct 4986 TAATTTATTCAAGGTAAA 5003 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595187516610