Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq1390 111 3e-22 >seq1390 Length=268060 Score = 111 bits (122), Expect = 3e-22 Identities = 176/251 (70%), Gaps = 6/251 (2%) Strand=Plus/Plus Query 62 GGCCGTCGCGTACAAGAAGCCTCGGGCCGCGTGTACCACACCGTCTACAATCCGCCAAAG 121 ||||||||||| || | | |||||||||| |||||||| | ||| ||||| ||| Sbjct 217844 GGCCGTCGCGTGCACGTGGGCTCGGGCCGCACCTACCACACGAAGTTCAACCCGCCCAAG 217903 Query 122 GTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAAGGACGACACCGAA 181 || | |||||||||||| || |||||||| || ||| | |||||| | ||||||| ||| Sbjct 217904 GTCGAAGGCAAGGACGACGTCACCGGCGAGGAGCTGATCCAGCGCGACGACGACAAGGAA 217963 Query 182 GAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCCGCTGGTGGACTTC 241 || ||||| | |||||| || || || | || || |||||||| |||| | Sbjct 217964 GAGACCGTCAAGAAGCGCCTGGAGGTCTATCAGGCCCAGACGCGTCCGCTGGTCGACTAC 218023 Query 242 TACCAGA----AGCTGGCTGCTGCCCAGGGCA--AGCCCAAGTACAGCCACGTTGAAGGC 295 ||| || || | | || || | ||| ||| ||||| ||| | | |||||| Sbjct 218024 TACTCGACCTGGGCCGCCAGCGGCGACGCGCAGGCGCCGCAGTACCGCCGCATCGAAGGC 218083 Query 296 GTTGGCTCGGT 306 | |||||||| Sbjct 218084 ATCGGCTCGGT 218094 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 899180532320