Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01001690.1 Length=455 Score E Sequences producing significant alignments: (Bits) Value seq1435 174 4e-41 >seq1435 Length=478137 Score = 174 bits (192), Expect = 4e-41 Identities = 283/405 (70%), Gaps = 17/405 (4%) Strand=Plus/Minus Query 3 ATCAGGAACACTTCACGGGCACCGGCGCCAAGGGCCGATTCACGGATGGCACGACGCTCC 62 || ||| | || | |||||| || || |||| || ||||| || || ||||| ||||| Sbjct 394524 ATGAGGTAAACCTGACGGGCGCCTGCCCCAATTGCTGATTCGCGAATCGCACGGCGCTCA 394465 Query 63 ACCTGGGTGGA-CTTGCACGGAACGCAGATCAGCACACGAGGGCTGGGCTGCAGGAAACT 121 || || ||||| | | | ||| ||||| || | | ||| || |||| | |||| Sbjct 394464 ACTTGTGTGGAACCTAC-CGGCACGCAAATAATAATACGTGGATTGGGTGAGAATAAACG 394406 Query 122 GTTTTCGTGAACCTTGTTGATGAAGTACTGCAGCATCTTCTCGCAGACGCTGAAGTCGGC 181 || |||| |||| ||| ||||| | ||||| | ||| | | ||||| || Sbjct 394405 TGACTCATGAATCTTGCGGATAAAGTATTTGAGCATTTGCTCAGTAATTGTAAAGTCTGC 394346 Query 182 GATCACGCCGTCTTTCATCGGACGAATGGCAGCAATATTGCCTGGTGTACGGCCGAGCAT 241 |||||||||||||||||||| ||||| || | ||||||| |||||| ||||| ||||| Sbjct 394345 AATCACGCCGTCTTTCATCGGGCGAATCGCCGTAATATTGGCTGGTGCGCGGCCTAGCAT 394286 Query 242 GCGCTTGGCCTCGGTGCCGACGGCAACGACACTTTTCTGATTACCA--TGGGTC------ 293 ||||||||| || ||| || |||| | ||||| || ||| ||| | Sbjct 394285 GCGCTTGGCTTCCAAGCCAACAGCAAGCAACGTTTTC---TTGCCAGCCGGGCCGCCCTC 394229 Query 294 ----CGAATGGCCACAACCGATGGCTCATTCAGGACGATACCGCGCTCGCGCACGTAAAT 349 |||||||| || || |||||||||| || || ||||| || || ||||| || Sbjct 394228 TTGGCGAATGGCAACGACTGATGGCTCATCCAACACAATACCTTTGTCACGAACGTAGAT 394169 Query 350 AAGGGTGTTGGCAGTGCCCAGGTCAATGGAAAGATCGCTGGAAAA 394 ||||| ||||| ||||| |||||||||| ||||| | ||||| Sbjct 394168 TAGGGTATTGGCTGTGCCAAGGTCAATGGCGAGATCATTTGAAAA 394124 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1353570694560