Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01001946.1 Length=179 Score E Sequences producing significant alignments: (Bits) Value seq1490 196 5e-48 >seq1490 Length=214893 Score = 196 bits (216), Expect = 5e-48 Identities = 137/156 (88%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 24 GTTGAGCGATGGCCCTTCCATTCAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 83 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| Sbjct 79177 GTTGAGCGATGGCCCTTCCATACAGAACCACCGGATCACTATGACCTGCTTTCGCACCTG 79118 Query 84 CTCGAGCCGTCACTCTCGCAGTCAAGCCAGCTTATGCCATTGCACTAACCTCACGATGTC 143 ||||| | ||| |||||||||||||| | ||||||||||||||||| | ||||| || Sbjct 79117 CTCGACCTGTCCGTCTCGCAGTCAAGCAACCTTATGCCATTGCACTATCAGTACGATTTC 79058 Query 144 CGACCGTGATTAGCTGACCTTCGTGCTCCTCCGTTA 179 ||||||| ||| | ||||||| ||||||||||| Sbjct 79057 CGACCGTACCTAGGTTACCTTCGCACTCCTCCGTTA 79022 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 473590066980