Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01002051.1 Length=353 Score E Sequences producing significant alignments: (Bits) Value seq1439 104 5e-20 >seq1439 Length=156656 Score = 104 bits (114), Expect = 5e-20 Identities = 138/188 (73%), Gaps = 4/188 (2%) Strand=Plus/Minus Query 1 CGACCGCCTGCGCCATGTGGCGGAGCGCGCCGAGCTGGGTGAAGGCCGCGAAGCGATCAT 60 |||||| |||||| ||||| |||||||||||| | || || | ||||| || || Sbjct 27953 CGACCGGCTGCGCTTCGTGGCCGAGCGCGCCGAGGTCGGCGAGGAACGCGAGGCCCTCTA 27894 Query 61 CGCCGTGACCATTCCCGAGAAGCCCGGCAGCTTCAAGGCG-TTCTGCGAGGCCGTGGGCA 119 ||| || ||||| |||||| ||| |||||||||| | || ||||||| | || ||| Sbjct 27893 CGCGGTCACCATCCCCGAGGAGCGCGGCAGCTTC-CGCCGCTTCTGCGCTG--GTCGGCG 27837 Query 120 AGCGCCAGATCACCGAATTCAACTACCGTTTCCACTCCGGCAGCGAGGCGCACATCTTTG 179 ||| | ||||| ||||| ||||| || | | ||| |||||||||| |||| | Sbjct 27836 GCCGCAGCGTGACCGAGTTCAATTACCGCATCTCCGACCGCAACGAGGCGCACGTCTTCG 27777 Query 180 TCGGCGTG 187 |||||||| Sbjct 27776 TCGGCGTG 27769 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1027177761120