Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq1731 610 2e-172 seq1732 594 2e-167 seq863 540 3e-151 seq453 462 7e-128 seq1571 426 5e-117 seq151 407 5e-111 seq1767 394 3e-107 seq87 365 1e-98 seq1298 345 1e-92 seq1233 300 5e-79 seq1538 82.4 2e-13 seq401 78.8 3e-12 >seq1731 Length=8278 Score = 610 bits (676), Expect = 2e-172 Identities = 464/539 (86%), Gaps = 19/539 (4%) Strand=Plus/Minus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| |||||||||||||| ||||| Sbjct 6792 CTTTTGTTCCACATGAGATTTCTGTTCTCATTGAGCTGACCTTAGGACACCTGTGTTATC 6733 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 ||||||||||||||||||||||||||||||||||||||||| ||||| || | |||| Sbjct 6732 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACGATGTCTTCCGCGTAGATC 6673 Query 127 GGC---CCGCGAAGGAC--CTT-AACGCCAGAAAATGGTCG-GTGAA---GACCAGTTCC 176 | | || | || | ||| ||| | |||| ||| | ||| ||| || Sbjct 6672 ACCAACCTGCAAGGGTCAGCTTCAACACTAGAACCATTTCGTGAGAAATGGAC----TCT 6617 Query 177 GCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCA-CTTGCGCCGAAACG 235 ||||| || ||||||||| ||| || | |||||||||||||| | | || || | Sbjct 6616 ACTTCACGGAATAAGTAAAACAACATTACGAGTAGTGGTATTTCATCGTTGGC---AAAG 6560 Query 236 GCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||| Sbjct 6559 CCTCCCACTTATTCTACACCTCATAAGTCATTTCACAACGTCGGACTAGAGTCAAGCTCA 6500 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 |||||||||||||||||||||||||| |||||||||||||||||||||| | ||||||| Sbjct 6499 ACAGGGTCTTCTTTCCCCGCTGATTCTTCCAAGCCCGTTCCCTTGGCTGTAGGTTCGCTA 6440 Query 356 GATAGTAG-ATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGA 414 |||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct 6439 GATAGTAGGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAATTAGA 6380 Query 415 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 474 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6379 TGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTT 6320 Query 475 GGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 6319 GGTTGAATTCCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 6261 >seq1732 Length=9078 Score = 594 bits (658), Expect = 2e-167 Identities = 462/540 (86%), Gaps = 18/540 (3%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| || ||||||||||||| ||||| Sbjct 3982 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCCTCTTAGGACACCTGTGTTATC 4041 Query 67 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTGACAATGTCATCAACCCG--GA 124 ||||||||||||||||||||||||||||||||||||| ||| |||| || | || || Sbjct 4042 GTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCAGACTTTGTC-TCT-CGCGTAGA 4099 Query 125 TCGGCCCGCGAAGGAC---CTTAACGCCAGAAA--ATGGTCGGTGAAGA-CCAGTTCCGC 178 || || || || ||||| | ||||| | || | | ||| || | | | Sbjct 4100 TCATCCGTTTAAAAACGGACTTAAGTCTAGAAACAAAGGCC--TCAAGGGCCTGATTCAA 4157 Query 179 TTCATTGAT-TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGG- 236 || || |||||||| ||| | | |||||||||||||| || ||| | Sbjct 4158 AACAACGAAATAAGTAAATTGACGCCAGGAGTAGTGGTATTTCAT---CGTCGATTTGCA 4214 Query 237 -CTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCA 295 ||||||||||||||||||||| ||||||| ||||||||||| ||||||||||||||||| Sbjct 4215 TCTCCCACTTATTCTACACCTCCCAAGTCAATTCACAAAGTCTGACTAGAGTCAAGCTCA 4274 Query 296 ACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 355 ||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct 4275 ACAGGGTCTTCTTTCCCCGCTGATTTTTCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTA 4334 Query 356 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 415 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4335 GATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGAT 4394 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4395 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTT 4454 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4455 GTTGAATTTCTCCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 4514 >seq863 Length=9128 Score = 540 bits (598), Expect = 3e-151 Identities = 451/536 (84%), Gaps = 27/536 (5%) Strand=Plus/Minus Query 14 TCTACAGGAGATTTCTGTTC-TCCATGAGTCCCC-CTTAGGACACC-TGCGTTATGGTTT 70 || ||| ||||||||||||| || |||| | | ||||||||||| |||||||| || Sbjct 8224 TCCACACGAGATTTCTGTTCATCGTTGAGGCTCATCTTAGGACACCATGCGTTATCTTTG 8165 Query 71 AACAGATGTGCCGCCCCAGCCAAACT-CCCCACCTGACAATGTCATCAACCCGGATCGGC 129 | |||||| ||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct 8164 TAAAGATGTTGCGCCCCAGCCAAACTTCCCCACCTGACAATGTCTTCCGCCCGGATCGGC 8105 Query 130 -CCGC-GAAGGACCTTAACGCCAGAAAATGGTCGGTGAAGACCAGTTCCGCTTCATTGAT 187 |||| | | |||| ||| || || | ||| || |||| |||| || Sbjct 8104 GCCGCTGGCGCGCCTTGGGTCCAAAAGGAGGGGGATGATCCCCGCCTCCGATTCACGGAA 8045 Query 188 TAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAAC-GGCTCCCACTTA 246 ||||||||| |||| ||| ||||||||||||||||| ||||| | |||||||||||| Sbjct 8044 TAAGTAAAATAACGTTAAAAGTAGTGGTATTTCACTTTCGCCGTTTCCGGCTCCCACTTA 7985 Query 247 TTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTC 306 | ||||||| |||| || |||||||||||||||||||||||||||||| Sbjct 7984 TCCTACACCCTTCAACTC------------CGGACTAGAGTCAAGCTCAACAGGGTCTTC 7937 Query 307 T-TTCCCCGCTGATTCCGC-CAAGCCCG-TTCCCTTGGCT-GTGGTTTCGCTAGATAGTA 362 | ||||||||||||||||| |||||||| ||||||||||| ||||||||||| ||||||| Sbjct 7936 TGTTCCCCGCTGATTCCGCGCAAGCCCGGTTCCCTTGGCTTGTGGTTTCGCTGGATAGTA 7877 Query 363 GATAGGG-ACAGTGGGAATCTCGTTAATCCATTCATGCGCGTC--ACTAATTAGATGACG 419 || |||| ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 7876 GACAGGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCTCACTAATTAGATGACG 7817 Query 420 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 479 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 7816 AGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTG 7757 Query 480 AATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 || |||||||||||||||||||||||||||||||||||||||||||||| | |||| Sbjct 7756 AA-TTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTGAGCATC 7702 >seq453 Length=12031 Score = 462 bits (512), Expect = 7e-128 Identities = 319/360 (89%), Gaps = 3/360 (1%) Strand=Plus/Plus Query 174 TCCGCTTCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAA 233 || || | ||||| ||||||||| | |||| | || ||||||||||| | ||| Sbjct 10723 TCTGCATTATTGAATAAGTAAAATATCGATTAAAGTGGTGGTATTTCA---GGATCGATT 10779 Query 234 CGGCTCCCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCT 293 ||||||| ||| ||||||||| | | || |||||| | | ||||||||||||||| Sbjct 10780 GCTCTCCCACCTATGCTACACCTCCAATGACACTTCACAGATACAGACTAGAGTCAAGCT 10839 Query 294 CAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGC 353 |||||||||||||||||||||||| || |||||||||||||||||||||||| ||||| Sbjct 10840 CAACAGGGTCTTCTTTCCCCGCTGTTTAGTCCAAGCCCGTTCCCTTGGCTGTGGGTTCGC 10899 Query 354 TAGATAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAG 413 |||| ||||||||||||||||||||||||| |||||||||||||||||||||||| |||| Sbjct 10900 TAGACAGTAGATAGGGACAGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAG 10959 Query 414 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 473 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 10960 ATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCT 11019 Query 474 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACA 533 |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||| Sbjct 11020 TGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGTGTCAACA 11079 Score = 100 bits (110), Expect = 9e-19 Identities = 73/85 (86%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| |||||| ||||||||||||||| |||| | |||||||||||||| ||||| Sbjct 8080 CTTTTGTTCTACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGGACACCTGTGTTATC 8139 Query 67 GTTTAACAGATGTGCCGCCCCAGCC 91 | || ||||||||||||||||||| Sbjct 8140 TTGTAGCAGATGTGCCGCCCCAGCC 8164 >seq1571 Length=97646 Score = 426 bits (472), Expect = 5e-117 Identities = 295/327 (90%), Gaps = 9/327 (3%) Strand=Plus/Plus Query 208 GTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATTCTACACCTCTCAAGTCATT 267 |||||||||||| || || | || | ||| ||||||||||||||||||||||||||| Sbjct 10036 GTAGTGGTATTTAACGGACGGCAAAGC--CTCTCACTTATTCTACACCTCTCAAGTCATT 10093 Query 268 TCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCAA 327 |||||| ||| |||||||||||||||||||||||||||||||||||||||||| |||| Sbjct 10094 TCACAACGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTATTCCAA 10153 Query 328 GCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTTA 387 |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||| ||| Sbjct 10154 GCCCGTTCCCTTGGCTGTGGGTTCGCTAGACAGTAGATAGGGACAGTGGGAATCTCATTA 10213 Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 ||||||||||||||||||||| | |||||||| ||||||| |||||| |||||||||| Sbjct 10214 ATCCATTCATGCGCGTCACTATTAGGATGACGA-GCATTTGCCTACCT--AGAGAGTCAT 10270 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCAC-TTTGACATTCAGAGCA 506 ||||||||| |||||||||||||||||||||||||| |||| |||||||||||||||| Sbjct 10271 AGTTACTCC--CCGTTTACCCGCGCTTGGTTGAATTTTCTCACTTTTGACATTCAGAGCA 10328 Query 507 CTGGGCAGAAATCACATTGCGTCAACA 533 || |||||||||||||||| ||||||| Sbjct 10329 CT-GGCAGAAATCACATTGTGTCAACA 10354 Score = 77.0 bits (84), Expect = 1e-11 Identities = 50/55 (91%), Gaps = 0/55 (0%) Strand=Plus/Plus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCC 100 || ||||||||||| ||||| |||||||||||||||| |||||||||||||||| Sbjct 1640 CCCTAGGACACCTGTGTTATCATTTAACAGATGTGCCGTCCCAGCCAAACTCCCC 1694 >seq151 Length=6618 Score = 407 bits (450), Expect = 5e-111 Identities = 241/248 (97%), Gaps = 4/248 (2%) Strand=Plus/Minus Query 298 AGGGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGA 357 ||||||||||||||||||||||| |||||||||||||||| |||||||||||||||||| Sbjct 2266 AGGGTCTTCTTTCCCCGCTGATTTTGCCAAGCCCGTTCCCT-GGCTGTGGTTTCGCTAGA 2208 Query 358 TAGTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATT--AGAT 415 ||||||||||||||||||| |||||||||||||||||||||||||||||||||| |||| Sbjct 2207 TAGTAGATAGGGACAGTGG-AATCTCGTTAATCCATTCATGCGCGTCACTAATTTTAGAT 2149 Query 416 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 475 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 2148 GACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTG 2089 Query 476 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACATC 535 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 2088 GTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCACATTGCGTCAACACC 2029 Query 536 ACTTTCTG 543 |||||||| Sbjct 2028 ACTTTCTG 2021 Score = 269 bits (298), Expect = 9e-70 Identities = 240/293 (82%), Gaps = 8/293 (3%) Strand=Plus/Minus Query 8 TTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATGG 67 ||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||| | Sbjct 2975 TTTTGTTCTACTGGA-ATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATCG 2917 Query 68 TTTAACAGATGTGCCGCCCC-AGCCAAACTCCCCACCTGACAATGTCATCAACCCGGATC 126 |||||||||||||||||||| |||||||||||||||||||||||||| ||| |||||| Sbjct 2916 TTTAACAGATGTGCCGCCCCAAGCCAAACTCCCCACCTGACAATGTCTCCAATTCGGATC 2857 Query 127 GGCCCGCGAAGGACCTTAACGCCAGAAAAT-GGTCGGTGAAGACCAGTTCCGCTTCATTG 185 | || | |||| ||| || | ||||| | || |||| |||||||||||| Sbjct 2856 -AAGCATAAATGCTTTTAAGTCCAAAAGGTGGGTCGTTAAAACCCAGCTCCGCTTCATTG 2798 Query 186 ATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCT-CCCACT 244 |||||||| | ||||| |||||||||||||||| |||||||| ||| |||||| Sbjct 2797 GATAAGTAAAGAGACGATGGAGGTAGTGGTATTTCACCGGCGCCGAA---GCTCCCCACT 2741 Query 245 TATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAAC 297 ||||||||||| || ||| ||||||| ||| |||||||||||||||||| Sbjct 2740 TATTCTACACCCTCCATGTCTCTTCACAATGTCAAACTAGAGTCAAGCTCAAC 2688 >seq1767 Length=130814 Score = 394 bits (436), Expect = 3e-107 Identities = 307/371 (83%), Gaps = 29/371 (8%) Strand=Plus/Minus Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTC 239 |||| | |||| |||| ||| || |||||||||||||||| || | || | ||| Sbjct 17365 TCATGGTATAAGAAAAACAACATTAGAGGTAGTGGTATTTCACGGACGGCAAAGC--CTC 17308 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAG 299 |||||||||||||||||| ||||||||||||||| ||| ||||||||||||||||||||| Sbjct 17307 CCACTTATTCTACACCTCCCAAGTCATTTCACAACGTCAGACTAGAGTCAAGCTCAACAG 17248 Query 300 GGTCTTCTTTCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATA 359 | |||||||||||||||| || |||||||||||||||||||||||| ||| Sbjct 17247 GATCTTCTTTCCCCGCTGGTTATTCCAAGCCCGTTCCCTTGGCTGTGGGTTC-------- 17196 Query 360 GTAGATAGGGACAGTGGGAATCTCGTTAATCCATTCA-------------------TGCG 400 |||||||||||| ||||||||||| |||||||||||| |||| Sbjct 17195 GTAGATAGGGACGGTGGGAATCTCATTAATCCATTCATGCGCGTCACTAGTTAGATTGCG 17136 Query 401 CGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 460 |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 17135 CGTCACTAGTTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCATAGTTACTCCCGCC 17076 Query 461 GTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCACTGGGCAGAAATCA 520 ||||||||||||||||||||||||||| ||||||||| |||||| || ||||| |||| Sbjct 17075 GTTTACCCGCGCTTGGTTGAATTTCTTAACTTTGACAGTCAGAGTTATGAGCAGAGATCA 17016 Query 521 CATTGCGTCAA 531 ||||| ||||| Sbjct 17015 CATTGTGTCAA 17005 >seq87 Length=14717 Score = 365 bits (404), Expect = 1e-98 Identities = 283/334 (85%), Gaps = 2/334 (1%) Strand=Plus/Minus Query 190 AGTaaaaaaaCGATAAG-GGTAGTGGTATTTCACTTGCGCCGAAACGGCTCCCACTTATT 248 ||| ||| ||| ||| || |||||||||||| | || | | ||||||| ||| Sbjct 7260 AGTGAAATAACAGTAAAAGGCAGTGGTATTTCATTGTCGA-GTTGCCCCTCCCACCTATG 7202 Query 249 CTACACCTCTCAAGTCATTTCACAAAGTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTT 308 ||||| | | || ||| |||||| || |||||||||||| ||||||||||||||||| Sbjct 7201 CTACATCCTTTTCGTTATTCCACAAAATCAGACTAGAGTCAAACTCAACAGGGTCTTCTT 7142 Query 309 TCCCCGCTGATTCCGCCAAGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGG 368 |||||||||| | |||||||||||||| ||||| | ||||||||| |||||||||| Sbjct 7141 TCCCCGCTGACAAACCTAAGCCCGTTCCCTTAGCTGTAGGTTCGCTAGAAAGTAGATAGG 7082 Query 369 GACAGTGGGAATCTCGTTAATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTG 428 |||||| ||||||||||| |||||||||||||||||| ||||| ||||||||||||||| Sbjct 7081 GACAGTAGGAATCTCGTTGTTCCATTCATGCGCGTCACAAATTAAATGACGAGGCATTTG 7022 Query 429 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTC 488 ||||||||||||||||||||||||||||||||||| ||||| ||||| | |||| ||||| Sbjct 7021 GCTACCTTAAGAGAGTCATAGTTACTCCCGCCGTTGACCCGTGCTTGATCGAATCTCTTC 6962 Query 489 ACTTTGACATTCAGAGCACTGGGCAGAAATCACA 522 |||||||||||||||||||||||||||| ||||| Sbjct 6961 ACTTTGACATTCAGAGCACTGGGCAGAAGTCACA 6928 Score = 84.2 bits (92), Expect = 7e-14 Identities = 55/61 (90%), Gaps = 0/61 (0%) Strand=Plus/Minus Query 46 CCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTCCCCACCTG 105 |||| | ||||||||||||| |||||||| ||||||||||||||||||||||| ||||| Sbjct 7432 CCTTTGTACACCTGCGTTATCTTTTAACAGTTGTGCCGCCCCAGCCAAACTCCCTACCTG 7373 Query 106 A 106 | Sbjct 7372 A 7372 >seq1298 Length=92593 Score = 345 bits (382), Expect = 1e-92 Identities = 452/581 (78%), Gaps = 66/581 (11%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTC-TGTTCTCCAT-GAGTCCCCCTTAGGACACCT--GCGT 62 |||||| |||||| |||||||| |||||| ||| ||| | ||||||||||||| | || Sbjct 27355 CTTTTGTTCTACATGAGATTTCCTGTTCTTCATTGAGCTCACCTTAGGACACCTTTGTGT 27414 Query 63 TATGGTTTAACAGATGT---GCCGCCCCA-GCCAAACTCCCCACCTGACAATGTCATCAA 118 ||| |||||||||||| ||||||||| |||||| ||| |||||| ||||| || | Sbjct 27415 TATCATTTAACAGATGTTTGGCCGCCCCAAGCCAAAACTCCCGCCTGACGATGTCTTCCA 27474 Query 119 C-----CCGGATCG-GC----CCGCGAAGGACCTTAACGCCAGAA---AATGGTCGGTGA 165 | | | ||| || || | | || |||| | |||| | || | | || Sbjct 27475 CGTAAACTCGCTCGAGCAAAGCCTCAAGGG--CTTATTACTAGAACTAACCGGGCCGCGA 27532 Query 166 AG-----ACCAGTTCCG-CTTCATTGATTAAGTaaaaaaaCGATAAGG-GTAGTGGTATT 218 || ||||||| | |||| | ||||||||||||| | | || |||||| |||| Sbjct 27533 AGCCCGCACCAGTTGTTACATCATGGTATAAGTAAAAAAACAACATGGAGTAGTG-TATT 27591 Query 219 TCACTTGCGCCGAAACGGCTCCCACTTATTCT--ACACCTCTC---AAGTCATTTCACAA 273 |||| || | ||| | |||||||||||||| ||||||| | |||||||| ||||| Sbjct 27592 TCACGGACGGC-AAAGGCCTCCCACTTATTCTTTACACCTCCCCCAAAGTCATT-CACAA 27649 Query 274 AGTCGGACTAGAG--TCAAGCTCAAC-AGGGT-CTTCTTTCCCCGCTGATTCCGCCAAG- 328 || |||||||| ||||||||||| ||||| |||||| ||||||||||| ||||| Sbjct 27650 CTTCAGACTAGAGGTTCAAGCTCAACCAGGGTTCTTCTT-CCCCGCTGATTAT-CCAAGG 27707 Query 329 -CCCGTTCCCTTGGCTGTGGT-TTCGCTAGAT-AGTA-GATAGGGACAGTGGGAATCTCG 384 ||||||||||||||||||| ||||||||| |||| ||| |||||||||||||||| Sbjct 27708 GCCCGTTCCCTTGGCTGTGGGGTTCGCTAGACCAGTATGATTAGGACAGTGGGAATCTCT 27767 Query 385 TTAATCCATTCATGCGC-GT-CACTAATTAGATGAC-GAGGCATTTGGCT-ACCTT-AAG 439 ||||||||||||||||| || ||||| ||||||||| ||||||||||||| ||||| ||| Sbjct 27768 TTAATCCATTCATGCGCAGTCCACTAGTTAGATGACGGAGGCATTTGGCTAACCTTAAAG 27827 Query 440 AGAGTCATAGTTAC--TCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACA 497 |||||||||||||| ||||||| |||| ||||||||||||||| |||||||||| || | Sbjct 27828 AGAGTCATAGTTACCTTCCCGCC-TTTA-CCGCGCTTGGTTGAA-TTCTTCACTTGGA-A 27883 Query 498 TTCA---GAGCACT-GGGCAG--AAATCACATTGCGTCAAC 532 |||| |||||| |||||| ||||||||||| | |||| Sbjct 27884 TTCAAGGAAGCACTGGGGCAGAAAAATCACATTGTGCCAAC 27924 >seq1233 Length=395398 Score = 300 bits (332), Expect = 5e-79 Identities = 212/240 (88%), Gaps = 2/240 (1%) Strand=Plus/Plus Query 268 TCACAAA-GTCGGACTAGAGTCAAGCTCAACAGGGTCTTCTTTCCCCGCTGATTCCGCCA 326 ||| ||| ||| ||||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 327050 TCAAAAACGTCAGACTAGAGTCAAGCTCAACAGGGTCTTCTCTCCCCGCTGATTTTCCCA 327109 Query 327 AGCCCGTTCCCTTGGCTGTGGTTTCGCTAGATAGTAGATAGGGACAGTGGGAATCTCGTT 386 || ||||| || || |||||| |||| ||| ||||||||||||||||| ||||||| | Sbjct 327110 AGTCCGTTACCCTG-CTGTGGGTTCGTTAGTCAGTAGATAGGGACAGTGTGAATCTCATC 327168 Query 387 AATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCA 446 ||||||||||||| |||||| | |||||||||||||| |||||||||||| ||||| ||| Sbjct 327169 AATCCATTCATGCACGTCACCAGTTAGATGACGAGGCCTTTGGCTACCTTGAGAGATTCA 327228 Query 447 TAGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCA 506 || |||||||||| ||||||||||||||||||||||| ||||||| |||||||||||||| Sbjct 327229 TAATTACTCCCGCTGTTTACCCGCGCTTGGTTGAATTACTTCACTATGACATTCAGAGCA 327288 >seq1538 Length=58067 Score = 82.4 bits (90), Expect = 2e-13 Identities = 56/63 (89%), Gaps = 0/63 (0%) Strand=Plus/Minus Query 38 TGAGTCCCCCTTAGGACACCTGCGTTATGGTTTAACAGATGTGCCGCCCCAGCCAAACTC 97 |||| | ||||||||| |||| ||||| |||||||||||||||||||||||||||||| Sbjct 20370 TGAGCTCACCTTAGGACTCCTGTGTTATCATTTAACAGATGTGCCGCCCCAGCCAAACTC 20311 Query 98 CCC 100 ||| Sbjct 20310 CCC 20308 >seq401 Length=568103 Score = 78.8 bits (86), Expect = 3e-12 Identities = 69/86 (80%), Gaps = 0/86 (0%) Strand=Plus/Plus Query 7 CTTTTGCTCTACAGGAGATTTCTGTTCTCCATGAGTCCCCCTTAGGACACCTGCGTTATG 66 |||||| || ||| ||||||||||||||| |||| | |||||| |||| || | ||| Sbjct 232850 CTTTTGTTCCACATGAGATTTCTGTTCTCATTGAGCTCACCTTAGAACACTTGTGCTATC 232909 Query 67 GTTTAACAGATGTGCCGCCCCAGCCA 92 ||||| ||||| || |||||||||| Sbjct 232910 ATTTAAAAGATGCGCTGCCCCAGCCA 232935 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635164597920