Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= AAMG01002244.1 Length=504 Score E Sequences producing significant alignments: (Bits) Value seq151 711 0.0 seq1732 603 3e-170 seq1731 497 3e-138 seq1767 464 2e-128 seq251 425 2e-116 seq1571 416 9e-114 seq863 394 3e-107 seq453 390 3e-106 seq1591 235 2e-59 seq1948 194 5e-47 seq87 141 3e-31 seq1352 111 5e-22 seq134 105 2e-20 seq2008 104 7e-20 seq1554 96.9 1e-17 seq1694 95.1 4e-17 seq2154 89.7 2e-15 seq1597 78.8 3e-12 >seq151 Length=6618 Score = 711 bits (788), Expect = 0.0 Identities = 467/507 (92%), Gaps = 9/507 (2%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||||||||||||||| |||||| || |||||||||||||||||| Sbjct 4901 GTACTCATTCCAATTACAAGACCCAAAAGGGCCCTGCATTGTTATTTATTGTCACTACCT 4842 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 4841 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 4782 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||| |||||||||||||||||| ||||||||| Sbjct 4781 TCTCAGGCTCCCTCTCCGGAATCGAACCCTTATTCCCCGTTACCCGTTGCAACCATGGTA 4722 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| ||||||||||||||| ||||||||||||||| ||||||||||| ||||||| || Sbjct 4721 GGCCTCTATCCTACCATCGACAGTTGATAGGGCAGATATTTGAATGAAGCATCGCCAGCA 4662 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCGAAGGGCGTTGGT 300 ||||||| ||||||||| ||||||||||||||||||| | | ||| ||| | ||| Sbjct 4661 CAAGGCCGTGCGATTCGAGAAGTTATTATGAATCACCA---AACTCCG-AGGAGGATGG- 4607 Query 301 TTTTTATCTAATAAATACACCCCTTCC-GAAGTCGGGG-TTTTTA-GCATGTATTAGCTC 357 ||||||||||||||||||||||||||| |||||||||| |||||| |||||||||||||| Sbjct 4606 TTTTTATCTAATAAATACACCCCTTCCAGAAGTCGGGGCTTTTTACGCATGTATTAGCTC 4547 Query 358 TAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTAA 417 |||||||||||| ||||||||||||| ||| || ||||||||||| ||||||||||||| Sbjct 4546 TAGAATTACCACAGTTATCCATGTAGCAAGAAAC-ATCAAATAAACTATAACTGATTTAA 4488 Query 418 TGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCTTAATCT 477 |||||||||||||||||||| ||||| |||| ||||||||||||||||||||||||||| Sbjct 4487 TGAGCCATTCGCAGTTTCACAGTATAATTTGCGTATACTTAGACATGCATGGCTTAATCT 4428 Query 478 TTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||| Sbjct 4427 TTGAGACAAGCATATGACTACTGGCAG 4401 >seq1732 Length=9078 Score = 603 bits (668), Expect = 3e-170 Identities = 442/509 (87%), Gaps = 5/509 (1%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||||| ||||| |||| |||| |||| ||||| |||||||||||| Sbjct 659 GTACTCATTCCAATTACCAGACCTAAAAAGGCCCGGTATTGTTATTTTTTGTCACTACCT 718 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 719 CCCTGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 778 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||| ||||||| || ||| |||| Sbjct 779 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTTAATGCCACGGTA 838 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | |||||| |||| ||||||| ||||||||||||||||||||||||| |||||| | Sbjct 839 GTCCACTACAGTACCGTCGAAAGCTGATAGGGCAGAAATTTGAATGAACTGTCGCCGACG 898 Query 241 CAAGGCCATGCGATTCGT-TAAGTTATTATGAATCACCAAG-GAGCCCCGAAGGGCGTTG 298 | ||| |||||| ||| |||||| |||||||||||||| |||| || ||| Sbjct 899 TGAAGCCGTGCGATCCGTAAAAGTTACTATGAATCACCAAGAGAGCAGTTGCCTGCATTG 958 Query 299 GTTTTTTATCTAATAAATACACCCCTTCC--GAAGTCGGGGTTTTTAGCATGTATTAGCT 356 ||||||||||||||||||||| ||||||| |||||||| || ||||||||||||| Sbjct 959 GTTTTTTATCTAATAAATACATCCCTTCCAAAAAGTCGGGACTTGACGCATGTATTAGCT 1018 Query 357 CTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTTA 416 |||||||||| ||||||||||| |||||||||||||||| | | || ||||||||| || Sbjct 1019 CTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATCGAGTGGACTATAACTGATATA 1078 Query 417 ATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGGCTTAAT 475 ||||||||||||||||||||| ||| | | ||| |||||||||||||||||||||||||| Sbjct 1079 ATGAGCCATTCGCAGTTTCACAGTACAAATTTGTTTATACTTAGACATGCATGGCTTAAT 1138 Query 476 CTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||| ||||||||||||||| Sbjct 1139 CTTTGAGACAAGCGTATGACTACTGGCAG 1167 >seq1731 Length=8278 Score = 497 bits (550), Expect = 3e-138 Identities = 425/515 (83%), Gaps = 20/515 (4%) Strand=Plus/Minus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||| |||| | || ||||| || |||||||||||||||||| Sbjct 2158 GTTCTCATTCCAATTGTCAGACTTAGAAAAGCCCGACATTGTTATTTATTGTCACTACCT 2099 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 ||| ||||| |||||||||||||| |||||||||||||||||||||||||||||||| || Sbjct 2098 CCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCATT 2039 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||||||||||||||||||||||||||||||||||| |||||||||||| || |||||||| Sbjct 2038 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTTACCCGTTAATGCCATGGTA 1979 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 ||||| || ||||||||| |||| |||||||||||||| | | || ||||| || Sbjct 1978 GGCCAATACCCTACCATCCAAAGCTGATAGGGCAGAAACTCAATCGATTTATCGC--GCA 1921 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC--CCCGAAG--GGCG 295 ||| ||||| || ||||||||||| ||| || | | | ||||||| || Sbjct 1920 AAAG----CGCGATCCGCACAGTTATTATGACTCAACACAATACCAGCCCGAAGACTGCA 1865 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCATGTA 350 |||| ||| ||||||||||| | ||| |||| ||| ||| ||| ||||||| Sbjct 1864 TTGG-TTTCAATCTAATAAATGCTACCCGCCCGACAAGCAGTTGGGTATTTATGCATGTA 1806 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 |||||||||||||||| ||||||||||| |||||||||||||||| | | || |||||| Sbjct 1805 TTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATCGAGTGGACTATAACT 1746 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGG 469 ||| ||||||||||||||||||||||| ||||| | ||| |||||||||||||||||||| Sbjct 1745 GATATAATGAGCCATTCGCAGTTTCAC-GTATAAAGTTGTTTATACTTAGACATGCATGG 1687 Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||| |||| |||||||||| Sbjct 1686 CTTAATCTTTGAGACAAGCGTATG-CTACTGGCAG 1653 >seq1767 Length=130814 Score = 464 bits (514), Expect = 2e-128 Identities = 421/518 (81%), Gaps = 24/518 (5%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59 || |||||||||||| | || | || ||||| | || ||||||||||||||||| Sbjct 293 GTTCTCATTCCAATTGCCGCACTCGAA-GAGCCAGAGCATTGTTATTTATTGTCACTACC 351 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| || || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 352 TCCCTGTATCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 411 Query 120 TTCTCAGGCTCCCTCTCCG-GAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGG 178 |||| |||||||||||| | | || |||||||||||||||||||||||| || |||||| Sbjct 412 TTCTAAGGCTCCCTCTCGGACAGTCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGG 471 Query 179 TAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGG 238 |||||| | |||||||||| |||| |||||||||||||| | | || ||||| | Sbjct 472 TAGGCCCATTTCCTACCATCCAAAGCTGATAGGGCAGAAACTCAATCGACTTATCGC--G 529 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA----AGGAGCCCCGAAGG-- 292 | ||| ||||| || | ||||||||| ||| || | || |||||||| Sbjct 530 CAAAAG----CGCGATCCG-CACATTATTATGACTCAACACAATACTAG-CCCGAAGGCT 583 Query 293 GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCAT 347 ||||||| ||| ||||||||||| | ||| |||| ||| ||| ||| |||| Sbjct 584 GCGTTGG-TTTCAATCTAATAAATGCTACCCGCCCGACAAGCAGTTGGGTATTTATGCAT 642 Query 348 GTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATA 407 ||||||||||||||||||| ||||||||||| |||||||||||||||| | | || ||| Sbjct 643 GTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATCGAGTGGACTATA 702 Query 408 ACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCA 466 |||||| ||||||||||||||||||||||| ||| | | ||| ||||||||||||||||| Sbjct 703 ACTGATATAATGAGCCATTCGCAGTTTCACAGTACAAATTTGTTTATACTTAGACATGCA 762 Query 467 TGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||||||||||||||| ||||||||||||||| Sbjct 763 TGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 800 >seq251 Length=11468 Score = 425 bits (470), Expect = 2e-116 Identities = 384/474 (81%), Gaps = 22/474 (5%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||||| ||||||||||||| || || ||||||| | || ||||||||||||||||| Sbjct 10191 TATTTAT-GTCACTACCTCCCTGTATCAGGATTGGATTTATTACGCGCCTGCTGCCTTCC 10249 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 ||||||||||||||||||||| ||||||||||||||||||| |||||||||||||||||| Sbjct 10250 TTGGATGTGGTAGCCGTTTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTA 10309 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 |||||| || |||||||||||| | |||||||||| |||| |||||||||||||| | Sbjct 10310 CCCGTTAATGCCATGGTAGGCCCATTTCCTACCATCCAAAGCTGATAGGGCAGAAACTCA 10369 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA---- 278 | || ||||| || ||| ||||| || | ||||||||| ||| || Sbjct 10370 ATCGACTTATCGC--GCAAAAG----CGCGATCCG-CACATTATTATGACTCAACACAAT 10422 Query 279 AGGAGCCCCGAAGG--GCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AG 331 | || |||||||| ||||||| ||| ||||||||||| | || |||| || Sbjct 10423 ACTAG-CCCGAAGGCTGCGTTGG-TTTCAATCTAATAAATGCTAACCGCCCGACAAGCAG 10480 Query 332 TCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTAC 391 | |||| ||| |||||||||||||||||| |||| || ||| |||| ||||| |||||| Sbjct 10481 TTGGGGATTTATGCATGTATTAGCTCTAGAGTTACTACAGTTTTCCAAGTAGTGAGGTAC 10540 Query 392 TATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCT 450 |||| | | || ||||||||| |||||||| ||||||| |||||| ||| | | ||| | Sbjct 10541 TATCCAGTGGACTATAACTGATATAATGAGCTATTCGCACTTTCACAGTACAAATTTGTT 10600 Query 451 TATACTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 || ||||||||||||||||||||||||||||||||||| ||||||||||||||| Sbjct 10601 TAAACTTAGACATGCATGGCTTAATCTTTGAGACAAGCGTATGACTACTGGCAG 10654 >seq1571 Length=97646 Score = 416 bits (460), Expect = 9e-114 Identities = 405/515 (79%), Gaps = 31/515 (6%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACC 59 || |||||||||||| | ||| | || ||||| | || |||| |||||||||||| Sbjct 23051 GTTCTCATTCCAATTGCCCGACGCGAA-GAGCCAGAGCATTGTTATT-ATTGTCACTACC 23108 Query 60 TCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 119 |||| || || |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 23109 TCCCTGTATCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGT 23168 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGT 179 |||| ||||||||||||||||||| |||||||||||||||||||||||| || ||||||| Sbjct 23169 TTCTAAGGCTCCCTCTCCGGAATCAAACCCTAATTCCCCGTTACCCGTTAATGCCATGGT 23228 Query 180 AGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATC-GCCGG 238 ||| || ||||||||||| |||| |||||||||||||| | | || ||| Sbjct 23229 AGGTCATAATCCTACCATCCAAAGCTGATAGGGCAGAAACTCAATCGATTTATCNNNNNN 23288 Query 239 CTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGGAGC--CCCGAAGGGCG 295 | ||| || |||| || ||||||||||| ||| || | | | ||||||| Sbjct 23289 CGCAAAAGCA--CGATCCGCACAGTTATTATGACTCAACACAATACCAGCCCGAAG---- 23342 Query 296 TTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCATGTA 350 ||||||||| | ||| |||| ||| ||| || |||||| Sbjct 23343 -----------ACTAATAAATGCTACCCGCCCGACAAGCAGTTGGGTATTCATGCATGT- 23390 Query 351 TTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACT 410 |||||||||||||||| |||||||||| |||||||||||||||| | | || |||||| Sbjct 23391 TTAGCTCTAGAATTACTACGGTTATCCGAGTAGTAAGGTACTATCGAGTGGACTATAACT 23450 Query 411 GATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATGG 469 ||| ||||||||||||||||||||||| ||| | | ||| |||||||||||||||||||| Sbjct 23451 GATATAATGAGCCATTCGCAGTTTCACAGTACAAATTTGTTTATACTTAGACATGCATGG 23510 Query 470 CTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||||| |||||||| |||||||||||||| Sbjct 23511 CTTAATCTTTAAGACAAGCTCATGACTACTGGCAG 23545 Score = 414 bits (458), Expect = 3e-113 Identities = 407/516 (79%), Gaps = 22/516 (4%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 || |||||||||||| | ||| | || | | | || ||||||| |||||||||| Sbjct 52266 GTTCTCATTCCAATTGCCCGACTCGAAGAACCAGAGCATGGTTATTTAT-GTCACTACCT 52324 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 || || || ||||||| | |||| ||||||||||||||||||||||||||||||||||| Sbjct 52325 CCTTGTATCAGGATTGGATTATTTACGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 52384 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 ||| ||||||||||| ||||||| ||||||||||||||||||||||| || ||||||| Sbjct 52385 TCTAAGGCTCCCTCTTCGGAATCAAACCCTAATTCCCCGTTACCCGTAAATGCCATGGTT 52444 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 |||| | |||||||||| |||| |||||||||||||| | | || ||||| || Sbjct 52445 GGCCCATTTCCTACCATCCAAAGCTGATAGGGCAGAAACTCAATCGATTTATCGC--GCA 52502 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA----AGGAGCCCCGAAG--GGC 294 ||| ||||| || | ||||||||| ||| || | || ||||||| || Sbjct 52503 AAAG----CGCGATCCG-CACATTATTATGACTCAACACAATACTAG-CCCGAAGACTGC 52556 Query 295 GTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGGGGTTTTTAGCATGT 349 ||||| ||| ||||||||||| | ||| |||| ||| |||| ||| |||||| Sbjct 52557 GTTGG-TTTCAATCTAATAAATGCTACCCGCCCGACAAGCAGTTGGGGATTTATGCATGT 52615 Query 350 ATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAAC 409 |||||||||||| |||| |||||| |||| |||||||||||||||| | | || ||||| Sbjct 52616 ATTAGCTCTAGAGTTACTACGGTTTTCCAAGTAGTAAGGTACTATCGAGTGGACTATAAC 52675 Query 410 TGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTATACTTAGACATGCATG 468 |||| ||||||| ||||||| |||||| ||| | | ||| ||| ||||||||||||||| Sbjct 52676 TGATATAATGAGATATTCGCACTTTCACAGTACAAATTTGTTTAAACTTAGACATGCATG 52735 Query 469 GCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||| ||||||||||||| ||||| ||||||||| Sbjct 52736 GCTTAAACTTTGAGACAAGCGTATGAGTACTGGCAG 52771 >seq863 Length=9128 Score = 394 bits (436), Expect = 3e-107 Identities = 427/530 (81%), Gaps = 42/530 (8%) Strand=Plus/Minus Query 5 TCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGT--ATTTATTGTCACTACCTCC 62 ||||||||||||| |||| || || || |||| || ||||||||||||||||||| Sbjct 3569 TCATTCCAATTACCAGACTTCAAGAAGGCCGGTATTTGTTTATTTATTGTCACTACCTCC 3510 Query 63 CCGTGTCGGGATTGGGTAATTTG-CGCGCCTGC-TGCCTTCCTTGGATGTGGTAGCCG-T 119 | ||| ||||||||||||||| ||||||||| |||||||||||||||||||||||| | Sbjct 3509 CGTGGTCAGGATTGGGTAATTTGCCGCGCCTGCTTGCCTTCCTTGGATGTGGTAGCCGCT 3450 Query 120 TTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA-CCCGTTGATACCATGG 178 |||||||||||||||||||||||||||||| |||| |||| | ||||| ||||||| | Sbjct 3449 TTCTCAGGCTCCCTCTCCGGAATCGAACCC--ATTCTCCGTCACCCCGTCAATACCATAG 3392 Query 179 TAGGCCACTATCCTACCATC-GAAAGTTGATAGGGCAGAAATTTGAATGA-ACCATC-GC 235 |||||| ||||||||||||| ||||||||||||||||||||||||||||| || || || Sbjct 3391 TAGGCC-CTATCCTACCATCGGAAAGTTGATAGGGCAGAAATTTGAATGATGCCGTCGGC 3333 Query 236 CGGCTC-AAGGCC---ATGCGATTCGT-TAAGTTATTATG-AATCACCAAGGAGCCCCG- 288 |||| | | |||| |||||| ||| |||||| ||| ||||| || |||| || Sbjct 3332 CGGCACGATGGCCTGGCTGCGATCCGTCGGAGTTATCATGAAATCATCA--GAGCAACGG 3275 Query 289 ---AAG-GGCGTTGGTTTTTTATCTAATAAATACACCCCTTCC-GA-AGTCGGGGTTTT- 341 ||| |||| | ||||||||||||||| || ||||||| || |||||||| ||| Sbjct 3274 GCAAAGCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGACAGTCGGGGGTTTG 3215 Query 342 -TAGCATG-TATTAGCTCTAGAA-TTACCACGGTTATCCATGTAGTAAGGTACTA-TCAA 397 | ||| | |||||||||||||| |||| |||||||||| |||| || ||| | |||| Sbjct 3214 ATTGCACGTTATTAGCTCTAGAACTTACTACGGTTATCCGAGTAG-CAGATACCATTCAA 3156 Query 398 ATAAACGA--TAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTT--AT 453 | |||| | ||||||||||||||||| ||| | || ||| || | ||| || | Sbjct 3155 ACAAACTAACTAACTGATTTAATGAGC--ATCG-ATTTCCACAGTCTGAATTAGTTCATT 3099 Query 454 ACTTAGACATGCATGGCTTAATCTTTG-AGACAAGCATATGAC-TACTGG 501 ||||| ||||||||||||| ||||||| ||||||||||||||| |||||| Sbjct 3098 ACTTACACATGCATGGCTTTATCTTTGAAGACAAGCATATGACTTACTGG 3049 >seq453 Length=12031 Score = 390 bits (432), Expect = 3e-106 Identities = 401/513 (78%), Gaps = 17/513 (3%) Strand=Plus/Plus Query 1 GTACTCATTCCAATTACAAGACCCAAAAGAGCCCTGTATCAGTATTTATTGTCACTACCT 60 ||||||||||||||| | || || | ||| || | | || |||||||||||||||||| Sbjct 6202 GTACTCATTCCAATTCCCAGGCCTAGAAG-GCTCGGGATTGTTATTTATTGTCACTACCT 6260 Query 61 CCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTT 120 | || | | ||||||||||||||||||||||||||||||||||| ||||||||| || Sbjct 6261 CGTCGAATTGACATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGAAGTGGTAGCCATT 6320 Query 121 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTA 180 |||||||||||||||||||||||||||||||||||||||| ||||||| ||||| ||| Sbjct 6321 TCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTCACCCGTTATCACCATTGTA 6380 Query 181 GGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCT 240 | ||| || |||| ||| ||||||||||||||||| | || |||| ||||| || Sbjct 6381 GTCCAATACACTACAATC--TAGTTGATAGGGCAGAAACTCGATCGAACTGTCGCCAGCA 6438 Query 241 CAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCAAGGAGCCCCG---AAGGGCGTT 297 | |||| ||||||| || || || |||||||| || | | | | || Sbjct 6439 CGAGGCTATGCGATCCGCTATCTTGGCTAGAATCACC--TGAACTCAGGTTACCCTGGTC 6496 Query 298 GGTTTTTTATCTAATAAATACACCCCTTCC--GAAGTC-GGGGTTTTTAGCATGTATTAG 354 ||||| |||||| || || ||||||| ||||| || ||| ||| ||||||| Sbjct 6497 GGTTTGGAATCTAACAAGCGCAGCCCTTCCCGAAAGTCAGGCCTTTAGTGCACGTATTAG 6556 Query 355 CTCTAGAATTACCACGGTTATCCATGT--AGTAAGGTACT-ATCAAATAAACGATAACTG 411 |||||||||||| || | ||||| || || |||| | ||| | || | ||||||| Sbjct 6557 CTCTAGAATTACTACAGATATCCGAGTAGAGATAGGTGTTGATCGAGTAGATTATAACTG 6616 Query 412 ATTTAATGAGCCATTCGCAGTTTCACTGTATAGATTGCTTATACTTAGACATGCATGGCT 471 |||||||||||||||||||||||| |||| || || || |||||||||||||||||| Sbjct 6617 ATTTAATGAGCCATTCGCAGTTTCGCTGTTTA-AT--ACTAAACTTAGACATGCATGGCT 6673 Query 472 TAATCTTTGAGACAAGCATATGACTACTGGCAG 504 |||||||| |||||||||||||||||||||||| Sbjct 6674 TAATCTTTAAGACAAGCATATGACTACTGGCAG 6706 >seq1591 Length=96509 Score = 235 bits (260), Expect = 2e-59 Identities = 239/299 (80%), Gaps = 18/299 (6%) Strand=Plus/Plus Query 209 AGGGCAGAAATTTGAATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTA 268 ||||||||||||||| ||| | || | ||||||||| || |||| ||| |||||||| Sbjct 1 AGGGCAGAAATTTGATTGATACG-CGTCAGCTCAAGGC-ATACGATCCGTAAAGTTATTG 58 Query 269 TGAATCACCAAGGAGCCCCGAAGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCG 328 ||||||||||||| | | | | | |||| |||| |||||||||| |||| | Sbjct 59 TGAATCACCAAGGCATCACT---GCCATCAGTTTCGTATCCAATAAATACAGCCCTCCTT 115 Query 329 AAGTCGGGGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAG- 387 | ||| || |||| ||||||||||||||||||||||| ||||||||||||| |||| Sbjct 116 ACGTCAGGCTTTT--GCATGTATTAGCTCTAGAATTAC-ACGGTTATCCATG--ATAAGT 170 Query 388 -GTACTATCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGAT 446 | |||||||| |||| |||||||||||||| |||||||||||||||||| | Sbjct 171 TGAACTATCAAGTAAATTATAACTGATTTAATAAGCCATTCGCAGTTTCAC---ACTCGG 227 Query 447 TGCTTATACTTAGACATGCATGGCTTAATC-TTTGAGACAAGCATATGACTACTGGCAG 504 |||||| ||||||||||||||||| ||||| |||| ||| ||||||||||||||||||| Sbjct 228 TGCTTAAACTTAGACATGCATGGC-TAATCTTTTGGGAC-AGCATATGACTACTGGCAG 284 >seq1948 Length=25480 Score = 194 bits (214), Expect = 5e-47 Identities = 353/504 (70%), Gaps = 21/504 (4%) Strand=Plus/Minus Query 4 CTCATTCCAATTACAAGACCCAAAAGAGCCCT-GTATCAGTATTTATTGTCACTACCTCC 62 |||||| ||||| | |||||||| ||||| | | |||||||||| ||| ||||| Sbjct 11133 CTCATTTCAATTGCCTGACCCAAA-GAGCCAGCGCGTTGTTATTTATTGTAACTGCCTCC 11075 Query 63 CCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTC 122 | || || ||||| ||||| || ||||||||| || |||| ||||||| || | | ||| Sbjct 11074 CTGTATCAGGATTCGGTAACTTACGCGCCTGCAGCATTCCGTGGATGTTGTTGTCATTTT 11015 Query 123 TCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTACCCGTTGATACCATGGTAGG 182 | ||||||||||||| ||||| || || || || || |||| ||||| ||| Sbjct 11014 TGAGGCTCCCTCTCCAGAATC-AATCCGAA-ACCATATTGTCCGTCACAGCCATGACAGG 10957 Query 183 CCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGAACCATCGCCGGCTCA 242 || |||| || |||| |||| ||| | |||||||| || | || ||| | Sbjct 10956 CCCGTATCATAACATCCAAAGCTGAAAAGGCAGAAACTTAACCGATTTATC----ACATT 10901 Query 243 AGGCCATGCGATTCGTTAAGTTATTATGAATC-ACCAAGGAGCCCCGA-AGGGCGTTGGT 300 || | |||||| | | |||||| |||| || || | ||| | | || || | Sbjct 10900 AGAC--TGCGATCCTTACAGTTATAATGACTCAACGCAATAGCTTAAAGACTGCATTCG- 10844 Query 301 TTTTTATCTAATAAAT-----ACACCCCTTCCGAAGTCGGGGTTTTTAGCATGTATTAGC 355 | | | |||||||| | ||| | || ||| | | ||| || ||||||||| Sbjct 10843 -TCTACTTTAATAAATGCTAGCCGCCCGATTCGGAGTTGAGTATTTGCGCTTGTATTAGC 10785 Query 356 TCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAAATAAACGATAACTGATTT 415 |||||| || | | || |||| ||||||||||||||| ||| || |||| |||||| Sbjct 10784 TCTAGAGCTA-AAAGATTGTCCAAGTAGTAAGGTACTATGGAATGGACTATAAATGATTT 10726 Query 416 AATGAGCCATTCGCAGTTTCACTGTATAG-ATTGCTTATACTTAGACATGCATGGCTTAA 474 |||| |||||||||| || ||| | || |||| ||| ||| ||||||||| | || || Sbjct 10725 AATGGGCCATTCGCACTTCCACAAAACAGAATTGTTTACACTAAGACATGCAAGACTCAA 10666 Query 475 TCTTTGAGACAAGCATATGACTAC 498 ||| | ||||| | ||||||||| Sbjct 10665 TCTATCAGACAGACGTATGACTAC 10642 >seq87 Length=14717 Score = 141 bits (156), Expect = 3e-31 Identities = 102/118 (86%), Gaps = 0/118 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| |||||||||||||| || | | ||||||||||||| ||||||||||||| ||| Sbjct 2463 TATTTCTTGTCACTACCTCCTCGAATTGAGATTGGGTAATTTTCGCGCCTGCTGCCGTCC 2404 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGT 160 || ||||| |||||| ||||||||||||||||||||||||| || || || |||||| Sbjct 2403 TTAGATGTAGTAGCCATTTCTCAGGCTCCCTCTCCGGAATCAGACACTGATCCCCCGT 2346 >seq1352 Length=115144 Score = 111 bits (122), Expect = 5e-22 Identities = 69/74 (93%), Gaps = 0/74 (0%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||| ||| ||||| |||||||||||||| ||||||||||||||||| Sbjct 68904 TATTTGTTGTCACTACCCCCCTGTGTCAGGATTGGGTAATTTACGCGCCTGCTGCCTTCC 68845 Query 103 TTGGATGTGGTAGC 116 |||||||||||||| Sbjct 68844 TTGGATGTGGTAGC 68831 >seq134 Length=12669 Score = 105 bits (116), Expect = 2e-20 Identities = 308/464 (66%), Gaps = 19/464 (4%) Strand=Plus/Plus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 || |||| || | | |||||| ||||| || | ||| ||| ||||||||| | |||| Sbjct 4648 TAATTATCGTAAGTGCCTCCCTGTGTCAGGGTAAGGTT-TTTACGCGCCTGCGGTATTCC 4706 Query 103 TTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCCCCGTTA 162 |||||| |||| || || | ||||||||| ||| | || || || ||| || | Sbjct 4707 GCGGATGTTGTAGTCGCTTTTTAGGCTCCCTTTCCAAATTC-AATCCGAATACCATATCG 4765 Query 163 CCCGTTGATACCATGGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTG 222 |||| | |||||||| ||| || | || ||| |||| |||||| ||||||| | Sbjct 4766 TCCGTCAAAGCCATGGTATGCCCGTACCATATCATTCAAAGCTGATAGAGCAGAAACATT 4825 Query 223 AATGAACCATCGCCGGCTCAAGGCCATGCGATTCGTTAAGTTATTATGAATCACCA-AGG 281 || ||||| | || | |||||| | |||| | |||| ||| | | Sbjct 4826 TCCGATTTATCGCATG----AGAC--TGCGATCCTCGCAGTTGTAATGACTCAACGCAAT 4879 Query 282 AGCCCCGA-AGGGCGTTGGTTTTTTATCTAATAAATACACCCCTTCCGA-----AGTCGG 335 ||||| | | || || || | |||||| || | || |||| ||| | Sbjct 4880 AGCCCAAAGACTGCATTCGTCCATA--CTAATAGATGCTAGCCGCCCGATTTGCAGTTGA 4937 Query 336 GGTTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATC 395 | ||| | ||||||||||||||| | ||| |||| | |||||| ||| ||||| Sbjct 4938 GTATTTGTGGTTGTATTAGCTCTAGAGCTTT-ACGATTATAAAAGTAGTACGGTGCTATC 4996 Query 396 AAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTA-TAGATTGCTTATA 454 | | || |||| ||| ||| |||||||||||| || ||| | | |||| || | Sbjct 4997 GAGTGGACTATAAATGAAATAAAGAGCCATTCGCACTTCCACAAAACAAAATTGTATACA 5056 Query 455 CTTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTAC 498 | | ||||||| |||| ||||| | || || || ||||||||| Sbjct 5057 TTAATACATGCAAGGCTCAATCTATCAGGCAGGCGTATGACTAC 5100 >seq2008 Length=12307 Score = 104 bits (114), Expect = 7e-20 Identities = 68/74 (92%), Gaps = 1/74 (1%) Strand=Plus/Minus Query 43 TATTTATTGTCACTACCTCCCCGTGTCGGGATTGGGTAATTTGCGCGCCTGCTGCCTTCC 102 ||||| ||||||||||| ||| ||||| |||||||||||||| |||| |||||||||||| Sbjct 447 TATTTGTTGTCACTACCCCCCTGTGTCAGGATTGGGTAATTTACGCG-CTGCTGCCTTCC 389 Query 103 TTGGATGTGGTAGC 116 |||||||||||||| Sbjct 388 TTGGATGTGGTAGC 375 >seq1554 Length=282741 Score = 96.9 bits (106), Expect = 1e-17 Identities = 63/68 (93%), Gaps = 1/68 (1%) Strand=Plus/Plus Query 422 CCATTCGCAGTTTCACTGTATAGATT-GCTTATACTTAGACATGCATGGCTTAATCTTTG 480 |||||||||||||||| ||| | ||| | ||||||||||||||||||||||||||||||| Sbjct 159652 CCATTCGCAGTTTCACAGTACAAATTTGTTTATACTTAGACATGCATGGCTTAATCTTTG 159711 Query 481 AGACAAGC 488 |||||||| Sbjct 159712 AGACAAGC 159719 >seq1694 Length=30872 Score = 95.1 bits (104), Expect = 4e-17 Identities = 66/75 (88%), Gaps = 0/75 (0%) Strand=Plus/Plus Query 338 TTTTTAGCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTATCAA 397 |||| ||||||||||||||||||||||| ||||||||||| |||||||||||||||| | Sbjct 30204 TTTTCTGCATGTATTAGCTCTAGAATTACTACGGTTATCCAAGTAGTAAGGTACTATCGA 30263 Query 398 ATAAACGATAACTGA 412 | || |||||||| Sbjct 30264 GTGGACTATAACTGA 30278 >seq2154 Length=2724 Score = 89.7 bits (98), Expect = 2e-15 Identities = 49/49 (100%), Gaps = 0/49 (0%) Strand=Plus/Plus Query 456 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 504 ||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1644 TTAGACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAG 1692 >seq1597 Length=134040 Score = 78.8 bits (86), Expect = 3e-12 Identities = 100/135 (74%), Gaps = 12/135 (9%) Strand=Plus/Minus Query 335 GGGTTTTTA-GCATGTATTAGCTCTAGAATTACCACGGTTATCCATGTAGTAAGGTACTA 393 |||| |||| | |||||| ||||||| |||||| |||||| || | |||||||||||| | Sbjct 87833 GGGTATTTACGTATGTATGAGCTCTA-AATTACTACGGTTTTCGAAGTAGTAAGGTACCA 87775 Query 394 TCAAATAAACGATAACTGATTTAATGAGCCATTCGCAGTTTCACTGTATAGA-TTGCTTA 452 | | | | ||||||||| |||| |||||||||| || | | ||| || Sbjct 87774 TAGAGTGGGCTATAACTGATATAAT---------GCAGTTTCACAATACAAATTTGTTTT 87724 Query 453 TACTTAGACATGCAT 467 ||| ||||||||||| Sbjct 87723 TACATAGACATGCAT 87709 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1510367299840