Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Plasmopara_20viticola_20[genbank_20GCA_5F001974925.1_202017-01-30] 2,165 sequences; 101,296,116 total letters Query= NC_032108.1 Length=589068 Score E Sequences producing significant alignments: (Bits) Value seq236 86.0 2e-11 >seq236 Length=160019 Score = 86.0 bits (94), Expect = 2e-11 Identities = 105/141 (74%), Gaps = 2/141 (1%) Strand=Plus/Plus Query 364430 GTCATACGAGAGGGAATGGAGAGAGGGTTGATGATGATGTCAGGCACCATGCCGTCAGCG 364489 ||||||||||| ||||| | | ||||| | || ||||| || ||||| || | Sbjct 50656 GTCATACGAGACGGAATCGCATGCGGGTTCACGACAATGTCCGGGGTAATGCCTTCGACA 50715 Query 364490 GTAAAGGGCATATCTTCGGGA-GGAACGATGAGACCAATGGTTCCCTTTTGCGCATAGCG 364548 ||||| ||||| ||||| || || ||| | | ||||| || ||||||||| ||| || Sbjct 50716 GTAAACGGCATGTCTTCTTGACGGTACG-TCATGCCAATCGTCCCCTTTTGCCCATGCCG 50774 Query 364549 AGAAGCAAACTTGTCGCCAAT 364569 |||||||||||||| ||||| Sbjct 50775 CGAAGCAAACTTGTCCCCAAT 50795 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1884834115018345