Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq1448 163 7e-38 >seq1448 Length=56290 Score = 163 bits (180), Expect = 7e-38 Identities = 196/264 (74%), Gaps = 8/264 (3%) Strand=Plus/Minus Query 18 TTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCC 77 ||||| | || |||||||||| ||||| ||||||||||| | | ||||||| || Sbjct 6528 TTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGTGGGGAAGTCGTTACACC 6469 Query 78 ATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTT 137 |||| |||||||| | | ||| | ||||||||||||||||||||||| ||||| | |||| Sbjct 6468 ATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGTCAGTGTT 6409 Query 138 ACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACC-CCATCAATT 196 ||||| ||||||||| | | | || | | || || |||| || || Sbjct 6408 ACGGCTGCCGTTTACTAG----ACATTAAATATCAAAGCAATA---AACCTTAATATTTT 6356 Query 197 AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTG 256 | | | | |||||||||||| |||| | ||||||| || ||| || || ||||| | Sbjct 6355 ATCATACTAGCACCGGGCAGGTGTCAGATCCTATACTTCATCTTACGATTTAGCAGAATC 6296 Query 257 CTGTGTTTTTAATAAACAGTCGCA 280 |||||||||||||||||||||||| Sbjct 6295 CTGTGTTTTTAATAAACAGTCGCA 6272 Score = 163 bits (180), Expect = 7e-38 Identities = 196/264 (74%), Gaps = 8/264 (3%) Strand=Plus/Plus Query 18 TTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCC 77 ||||| | || |||||||||| ||||| ||||||||||| | | ||||||| || Sbjct 15239 TTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGTGGGGAAGTCGTTACACC 15298 Query 78 ATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTT 137 |||| |||||||| | | ||| | ||||||||||||||||||||||| ||||| | |||| Sbjct 15299 ATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGTCAGTGTT 15358 Query 138 ACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACC-CCATCAATT 196 ||||| ||||||||| | | | || | | || || |||| || || Sbjct 15359 ACGGCTGCCGTTTACTAG----ACATTAAATATCAAAGCAATA---AACCTTAATATTTT 15411 Query 197 AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTG 256 | | | | |||||||||||| |||| | ||||||| || ||| || || ||||| | Sbjct 15412 ATCATACTAGCACCGGGCAGGTGTCAGATCCTATACTTCATCTTACGATTTAGCAGAATC 15471 Query 257 CTGTGTTTTTAATAAACAGTCGCA 280 |||||||||||||||||||||||| Sbjct 15472 CTGTGTTTTTAATAAACAGTCGCA 15495 Score = 159 bits (176), Expect = 9e-37 Identities = 196/264 (74%), Gaps = 9/264 (3%) Strand=Plus/Minus Query 18 TTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTTACGCC 77 ||||| | || |||||||||| ||||| ||||||||||| | | ||||||| || Sbjct 55167 TTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGTGG-GAAGTCGTTACACC 55109 Query 78 ATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTATTGTT 137 |||| |||||||| | | ||| | ||||||||||||||||||||||| ||||| | |||| Sbjct 55108 ATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGTCAGTGTT 55049 Query 138 ACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACC-CCATCAATT 196 ||||| ||||||||| | | | || | | || || |||| || || Sbjct 55048 ACGGCTGCCGTTTACTAG----ACATTAAATATCAAAGCAATA---AACCTTAATATTTT 54996 Query 197 AACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTG 256 | | | | |||||||||||| |||| | ||||||| || ||| || || ||||| | Sbjct 54995 ATCATACTAGCACCGGGCAGGTGTCAGATCCTATACTTCATCTTACGATTTAGCAGAATC 54936 Query 257 CTGTGTTTTTAATAAACAGTCGCA 280 |||||||||||||||||||||||| Sbjct 54935 CTGTGTTTTTAATAAACAGTCGCA 54912 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260781743616