Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01000753.1 Length=364 Score E Sequences producing significant alignments: (Bits) Value seq1448 214 4e-53 >seq1448 Length=56290 Score = 214 bits (236), Expect = 4e-53 Identities = 267/361 (74%), Gaps = 9/361 (2%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||| | ||||||| || ||||||||| ||||||| || ||||||||| || ||| Sbjct 6535 CGGCGTTTTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGTGGGGAAGTCG 6476 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||| ||| |||| | | ||| | ||||||||||||||||||||||| ||||| Sbjct 6475 TTACACCATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGT 6416 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGT-TCACTGCTTCGATTGCTCTAACAGA 183 | |||||||| |||||||||| | |||| | ||| | | || || | | | Sbjct 6415 CAGTGTTACGGCTGCCGTTTACTAGACATTAAATATCAAAG---CAATAAACCTTA-ATA 6360 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 | ||| | | | ||||||||||||| ||||| |||||||| || |||| ||| |||| Sbjct 6359 T---TTTATCATACTAGCACCGGGCAGGTGTCAGATCCTATACTTCATCTTACGATTTAG 6303 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGA 303 ||||| ||||||||||| ||||||||||| ||| || | | ||| || | Sbjct 6302 CAGAATCCTGTGTTTTTAATAAACAGTCGCAACCCCCTTTTATATAACTCCTAGTTTA-A 6244 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCT 363 ||| || |||| || ||||||| |||| ||||||||||||||| || |||||||| Sbjct 6243 TAGGAACTTTTTCTTCCAAAGTTACAAAGTCAATTTGCCGAGTTCCTTCACCATAGTTCT 6184 Query 364 C 364 | Sbjct 6183 C 6183 Score = 214 bits (236), Expect = 4e-53 Identities = 267/361 (74%), Gaps = 9/361 (2%) Strand=Plus/Plus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||| | ||||||| || ||||||||| ||||||| || ||||||||| || ||| Sbjct 15232 CGGCGTTTTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGTGGGGAAGTCG 15291 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||| ||| |||| | | ||| | ||||||||||||||||||||||| ||||| Sbjct 15292 TTACACCATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGT 15351 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGT-TCACTGCTTCGATTGCTCTAACAGA 183 | |||||||| |||||||||| | |||| | ||| | | || || | | | Sbjct 15352 CAGTGTTACGGCTGCCGTTTACTAGACATTAAATATCAAAG---CAATAAACCTTA-ATA 15407 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 | ||| | | | ||||||||||||| ||||| |||||||| || |||| ||| |||| Sbjct 15408 T---TTTATCATACTAGCACCGGGCAGGTGTCAGATCCTATACTTCATCTTACGATTTAG 15464 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGA 303 ||||| ||||||||||| ||||||||||| ||| || | | ||| || | Sbjct 15465 CAGAATCCTGTGTTTTTAATAAACAGTCGCAACCCCCTTTTATATAACTCCTAGTTTA-A 15523 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCT 363 ||| || |||| || ||||||| |||| ||||||||||||||| || |||||||| Sbjct 15524 TAGGAACTTTTTCTTCCAAAGTTACAAAGTCAATTTGCCGAGTTCCTTCACCATAGTTCT 15583 Query 364 C 364 | Sbjct 15584 C 15584 Score = 210 bits (232), Expect = 5e-52 Identities = 267/361 (74%), Gaps = 10/361 (3%) Strand=Plus/Minus Query 5 CGGCATCTTCACCGGGATTACAATTTCACCGAGTCTATTGTTGAGACAGTGCCCAAATCG 64 |||| | ||||||| || ||||||||| ||||||| || ||||||||| || ||| Sbjct 55174 CGGCGTTTTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGTGGG-AAGTCG 55116 Query 65 TTACGCCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 124 |||| || ||| ||| |||| | | ||| | ||||||||||||||||||||||| ||||| Sbjct 55115 TTACACCATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGT 55056 Query 125 TATAGTTACGGCCGCCGTTTACTGGGGCTTAAGT-TCACTGCTTCGATTGCTCTAACAGA 183 | |||||||| |||||||||| | |||| | ||| | | || || | | | Sbjct 55055 CAGTGTTACGGCTGCCGTTTACTAGACATTAAATATCAAAG---CAATAAACCTTA-ATA 55000 Query 184 TCCCCTTAACCTTCCAGCACCGGGCAGGCGTCAGCTCCTATACATCGTCTTGCGACTTAG 243 | ||| | | | ||||||||||||| ||||| |||||||| || |||| ||| |||| Sbjct 54999 T---TTTATCATACTAGCACCGGGCAGGTGTCAGATCCTATACTTCATCTTACGATTTAG 54943 Query 244 CAGAAACCTGTGTTTTTGGTAAACAGTCGCTTGGGCCTATTCTCTGCGGCCTGTCATAGA 303 ||||| ||||||||||| ||||||||||| ||| || | | ||| || | Sbjct 54942 CAGAATCCTGTGTTTTTAATAAACAGTCGCAACCCCCTTTTATATAACTCCTAGTTTA-A 54884 Query 304 CAGGCACCCCTTCTCCCTAAGTTACGGGGTCATTTTGCCGAGTTCCTTAACAATAGTTCT 363 ||| || |||| || ||||||| |||| ||||||||||||||| || |||||||| Sbjct 54883 TAGGAACTTTTTCTTCCAAAGTTACAAAGTCAATTTGCCGAGTTCCTTCACCATAGTTCT 54824 Query 364 C 364 | Sbjct 54823 C 54823 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1062384616448