Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01001138.1 Length=202 Score E Sequences producing significant alignments: (Bits) Value seq1448 105 7e-21 >seq1448 Length=56290 Score = 105 bits (116), Expect = 7e-21 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| ||||| ||| | | ||||||| | |||||||||| ||||||||| || Sbjct 6562 GGGTCTTCGCGTCCTATCACAAGAAATCGGCGTTTTCACCGATATATCAATTTCACAAAG 6503 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | ||| ||||||| |||||||||| |||||||| | | ||| | || Sbjct 6502 TCTATGGTGGAGACAGTGGGGAAGTCGTTACACCATTCATGCAGGTCAGTAATTAGCTGA 6443 Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||| ||||| Sbjct 6442 CAAGGAATTTCGCTACCTTAGAACCGT 6416 Score = 105 bits (116), Expect = 7e-21 Identities = 109/147 (74%), Gaps = 0/147 (0%) Strand=Plus/Plus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| ||||| ||| | | ||||||| | |||||||||| ||||||||| || Sbjct 15205 GGGTCTTCGCGTCCTATCACAAGAAATCGGCGTTTTCACCGATATATCAATTTCACAAAG 15264 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | ||| ||||||| |||||||||| |||||||| | | ||| | || Sbjct 15265 TCTATGGTGGAGACAGTGGGGAAGTCGTTACACCATTCATGCAGGTCAGTAATTAGCTGA 15324 Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||| ||||| Sbjct 15325 CAAGGAATTTCGCTACCTTAGAACCGT 15351 Score = 100 bits (110), Expect = 3e-19 Identities = 109/147 (74%), Gaps = 1/147 (1%) Strand=Plus/Minus Query 25 GGGTCTTTTCGTCCCATCGCGGGTAATCGGCATCTTCACCGATACTACAATTTCACTGAG 84 ||||||| ||||| ||| | | ||||||| | |||||||||| ||||||||| || Sbjct 55201 GGGTCTTCGCGTCCTATCACAAGAAATCGGCGTTTTCACCGATATATCAATTTCACAAAG 55142 Query 85 CTCACGGTTGAGACAGNNNNNNNNNNNNTACACCATTCGTGCAGGTCGGAACTTACCCGA 144 | ||| ||||||| |||||||||| |||||||| | | ||| | || Sbjct 55141 TCTATGGTGGAGACAGTGGGAAGTCGT-TACACCATTCATGCAGGTCAGTAATTAGCTGA 55083 Query 145 CAAGGAATTTCGCTACCTTAGGACCGT 171 ||||||||||||||||||||| ||||| Sbjct 55082 CAAGGAATTTCGCTACCTTAGAACCGT 55056 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 547192324152