Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01001213.1 Length=600 Score E Sequences producing significant alignments: (Bits) Value seq1448 105 2e-20 >seq1448 Length=56290 Score = 105 bits (116), Expect = 2e-20 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| || ||||||||||| |||||||||| ||||||||| |||| ||||| || Sbjct 5471 ATTTCGCAGAAAACCAGCTATCTTCAAGTTTGATTAGCCTTTCACTCCTAACCACAAATC 5412 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 ||||| | || |||| || | |||||||||| || || |||||| |||| Sbjct 5411 ATCCCAGTATATTGCAACATACACGAGTTCGGTCCTTCAACAAGTGTTACCCTGTTTTCA 5352 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTT 307 ||||| ||||| |||||||||| ||||||| || Sbjct 5351 ACCTGTTCATGGTTAGATCACTTGATTTCGGGTATT 5316 Score = 105 bits (116), Expect = 2e-20 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| || ||||||||||| |||||||||| ||||||||| |||| ||||| || Sbjct 16297 ATTTCGCAGAAAACCAGCTATCTTCAAGTTTGATTAGCCTTTCACTCCTAACCACAAATC 16356 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 ||||| | || |||| || | |||||||||| || || |||||| |||| Sbjct 16357 ATCCCAGTATATTGCAACATACACGAGTTCGGTCCTTCAACAAGTGTTACCCTGTTTTCA 16416 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTT 307 ||||| ||||| |||||||||| ||||||| || Sbjct 16417 ACCTGTTCATGGTTAGATCACTTGATTTCGGGTATT 16452 Score = 105 bits (116), Expect = 2e-20 Identities = 117/156 (75%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 152 ATTTCGGGGAGAACCAGCTATCACGAAGTTTGATTGGCCTTTCACCCCTATCCACAGGTC 211 |||||| || ||||||||||| |||||||||| ||||||||| |||| ||||| || Sbjct 54110 ATTTCGCAGAAAACCAGCTATCTTCAAGTTTGATTAGCCTTTCACTCCTAACCACAAATC 54051 Query 212 ATCCCCTCAGTTTTCAACCTAAGTGGGTTCGGTCCTCCACGCGGTCTTACCCGCGCTTCA 271 ||||| | || |||| || | |||||||||| || || |||||| |||| Sbjct 54050 ATCCCAGTATATTGCAACATACACGAGTTCGGTCCTTCAACAAGTGTTACCCTGTTTTCA 53991 Query 272 ACCTGCCCATGGATAGATCACTTCGCTTCGGGTCTT 307 ||||| ||||| |||||||||| ||||||| || Sbjct 53990 ACCTGTTCATGGTTAGATCACTTGATTTCGGGTATT 53955 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1817573681152