Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01001962.1 Length=275 Score E Sequences producing significant alignments: (Bits) Value seq1448 145 1e-32 >seq1448 Length=56290 Score = 145 bits (160), Expect = 1e-32 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Minus Query 48 ACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCC 107 || ||||| | || | || | ||||| || | || || | ||||||||| |||| | Sbjct 7225 ACGTAGCTACTCAACGATACTCTTGGTAGAATAATTGATAAACCAGAGGTCAA-CCATAC 7167 Query 108 CGG-TCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 |||| |||||||| | ||||| |||| || || | || || ||||| Sbjct 7166 TTAATCCTTACGTACTAAAGTATTCTCCTTTCAATATTATAACCCTCATGATAGATAGAA 7107 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 ||| ||||||||| ||||||| | |||||||||||||| || ||||||| |||||||||| Sbjct 7106 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCGCGTACCACTTTAATTGGCGAACAGC 7047 Query 227 CCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | ||||||| | ||||||| |||| | |||||| || |||||||||||| Sbjct 7046 CAAACCCTTAGAACCTACTGCAGCACTAGGATGTGATGAGCCGACATCG 6998 Score = 145 bits (160), Expect = 1e-32 Identities = 171/229 (75%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 48 ACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCC 107 || ||||| | || | || | ||||| || | || || | ||||||||| |||| | Sbjct 14542 ACGTAGCTACTCAACGATACTCTTGGTAGAATAATTGATAAACCAGAGGTCAA-CCATAC 14600 Query 108 CGG-TCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 |||| |||||||| | ||||| |||| || || | || || ||||| Sbjct 14601 TTAATCCTTACGTACTAAAGTATTCTCCTTTCAATATTATAACCCTCATGATAGATAGAA 14660 Query 167 ACCGAACTGTCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAGC 226 ||| ||||||||| ||||||| | |||||||||||||| || ||||||| |||||||||| Sbjct 14661 ACCAAACTGTCTCACGACGTTTTAAACCCAGCTCGCGTACCACTTTAATTGGCGAACAGC 14720 Query 227 CCAACCCTTGGGACCTACTTCAGCCCCAGGATGAGACGAGCCGACATCG 275 | ||||||| | ||||||| |||| | |||||| || |||||||||||| Sbjct 14721 CAAACCCTTAGAACCTACTGCAGCACTAGGATGTGATGAGCCGACATCG 14769 Score = 132 bits (146), Expect = 8e-29 Identities = 171/231 (74%), Gaps = 4/231 (2%) Strand=Plus/Minus Query 48 ACTTAGCTTCCCAGCTATGCACTTGGCAGTACAACTGGTGCACCAGAGGTTTGTCCATCC 107 || ||||| | || | || | ||||| || | || || | ||||||||| |||| | Sbjct 55865 ACGTAGCTACTCAACGATACTCTTGGTAGAATAATTGATAAACCAGAGGTCAA-CCATAC 55807 Query 108 CGG-TCCTCTCGTACTAAGGACAGCTCCTCTCAAATTTCCTACGCCCACGACGGATAGGG 166 |||| |||||||| | ||||| |||| || || | || || ||||| Sbjct 55806 TTAATCCTTACGTACTAAAGTATTCTCCTTTCAATATTATAACCCTCATGATAGATAGAA 55747 Query 167 ACCGAACTG-TCTCGCGACGTTCTGAACCCAGCTCGCGTGCCTCTTTAATGGGCGAACAG 225 ||| ||||| |||| ||||||| | |||||||||||||| || ||||||| ||||||||| Sbjct 55746 ACCAAACTGGTCTCACGACGTTTTAAACCCAGCTCGCGTACCACTTTAATTGGCGAACAG 55687 Query 226 CCCAACCCTTGGGACCTACT-TCAGCCCCAGGATGAGACGAGCCGACATCG 275 || ||||||| | ||||||| |||| | |||||| || |||||||||||| Sbjct 55686 CCAAACCCTTAGAACCTACTGGCAGCACTAGGATGTGATGAGCCGACATCG 55636 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 780789047328