Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01002175.1 Length=414 Score E Sequences producing significant alignments: (Bits) Value seq1448 91.5 4e-16 >seq1448 Length=56290 Score = 91.5 bits (100), Expect = 4e-16 Identities = 127/177 (72%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 19 GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCC 78 |||||| ||| || | | || |||| |||| ||| || |||||| ||||||||| | Sbjct 3428 GCCTTCATCACTCATGTAGAATTGCTGGATCAAACTTTCGTTCATTGTCCAATATTCCTC 3369 Query 79 ACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTC 138 ||||||| || | || ||| || ||||||||| ||| ||||||||||| ||| Sbjct 3368 ACTGCTGGCTTTAAAAA-AGCTTGGGCCTTGTCTCAGTCCCAATGTGGCTGGTCGATCTC 3310 Query 139 TCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 ||| ||| ||| |||| ||| || ||| || | ||| | ||||| | |||||| Sbjct 3309 TCAATCCAACTAAAGATCATCGGCTTGGTAAGCTCTGACCTCACCAACAACCTAATC 3253 Score = 91.5 bits (100), Expect = 4e-16 Identities = 127/177 (72%), Gaps = 1/177 (1%) Strand=Plus/Plus Query 19 GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCC 78 |||||| ||| || | | || |||| |||| ||| || |||||| ||||||||| | Sbjct 18341 GCCTTCATCACTCATGTAGAATTGCTGGATCAAACTTTCGTTCATTGTCCAATATTCCTC 18400 Query 79 ACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTC 138 ||||||| || | || ||| || ||||||||| ||| ||||||||||| ||| Sbjct 18401 ACTGCTGGCTTTAAAAA-AGCTTGGGCCTTGTCTCAGTCCCAATGTGGCTGGTCGATCTC 18459 Query 139 TCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 ||| ||| ||| |||| ||| || ||| || | ||| | ||||| | |||||| Sbjct 18460 TCAATCCAACTAAAGATCATCGGCTTGGTAAGCTCTGACCTCACCAACAACCTAATC 18516 Score = 91.5 bits (100), Expect = 4e-16 Identities = 127/177 (72%), Gaps = 1/177 (1%) Strand=Plus/Minus Query 19 GCCTTCTTCATACACGCGGCATGGCTGCATCAGGCTTGCGCCCATTGTGCAATATTCCCC 78 |||||| ||| || | | || |||| |||| ||| || |||||| ||||||||| | Sbjct 52067 GCCTTCATCACTCATGTAGAATTGCTGGATCAAACTTTCGTTCATTGTCCAATATTCCTC 52008 Query 79 ACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGGCTGGTCATCCTC 138 ||||||| || | || ||| || ||||||||| ||| ||||||||||| ||| Sbjct 52007 ACTGCTGGCTTTAAAAA-AGCTTGGGCCTTGTCTCAGTCCCAATGTGGCTGGTCGATCTC 51949 Query 139 TCAGACCAGCTAGGGATCGTCGCCTAGGTGGGCCATTACCCCGCCAACTAGCTAATC 195 ||| ||| ||| |||| ||| || ||| || | ||| | ||||| | |||||| Sbjct 51948 TCAATCCAACTAAAGATCATCGGCTTGGTAAGCTCTGACCTCACCAACAACCTAATC 51892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1222382299648