Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq1448 80.6 6e-13 >seq1448 Length=56290 Score = 80.6 bits (88), Expect = 6e-13 Identities = 219/330 (66%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||| ||| || || | |||||||||||| ||||| ||||| ||||| |||||||| || Sbjct 3484 AAGTCCCAGCAAATTTCGTGCCAGCAGCTGCGGTTATACGAGAGGGGCAAGCGTTATTCG 3543 Query 73 GAATTACTGGGCGTAAAGGGTGCGT-AGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATG 131 |||||||||||||| || | ||||| ||| |||||| | | || ||| Sbjct 3544 TCTTTACTGGGCGTAAAAAGTTTTTCAGGTGATTTTTTAAGTTGAATATTTAAATCTAAA 3603 Query 132 GCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 |||||| | | | | | | ||| | | |||| | || | | ||| Sbjct 3604 GCTCAA-CTTTAGTCAATTATCAATACTAAAAAATTTGAGTATAACAGAAGATAACAGAA 3662 Query 192 TTCCTAGTGTAGCGGTGAAATGCG-TAGATATTAGGAGGAA-CACCAGTGGCGAAGGCGG 249 || ||||| || | |||| || | | ||||| | ||| || | ||||||||| | Sbjct 3663 TTTCTAGTTCAGGTTTAAAATCCGATTCAGATTAGAAAGAATAACTATAGGCGAAGGCAG 3722 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 | || | | ||||||||| | |||| || |||| ||| || |||||| | || Sbjct 3723 TTATCTAGGTTAATACTGACACTCAAAAACGAAGGCATGGGTAGCGAAAAGGATTTGGTA 3782 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAAT 339 |||| ||||||| || |||||| |||||| Sbjct 3783 CCCTTATAGTCCATGCAGTAAACTATGAAT 3812 Score = 80.6 bits (88), Expect = 6e-13 Identities = 219/330 (66%), Gaps = 4/330 (1%) Strand=Plus/Minus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||| ||| || || | |||||||||||| ||||| ||||| ||||| |||||||| || Sbjct 18285 AAGTCCCAGCAAATTTCGTGCCAGCAGCTGCGGTTATACGAGAGGGGCAAGCGTTATTCG 18226 Query 73 GAATTACTGGGCGTAAAGGGTGCGT-AGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATG 131 |||||||||||||| || | ||||| ||| |||||| | | || ||| Sbjct 18225 TCTTTACTGGGCGTAAAAAGTTTTTCAGGTGATTTTTTAAGTTGAATATTTAAATCTAAA 18166 Query 132 GCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 |||||| | | | | | | ||| | | |||| | || | | ||| Sbjct 18165 GCTCAA-CTTTAGTCAATTATCAATACTAAAAAATTTGAGTATAACAGAAGATAACAGAA 18107 Query 192 TTCCTAGTGTAGCGGTGAAATGCG-TAGATATTAGGAGGAA-CACCAGTGGCGAAGGCGG 249 || ||||| || | |||| || | | ||||| | ||| || | ||||||||| | Sbjct 18106 TTTCTAGTTCAGGTTTAAAATCCGATTCAGATTAGAAAGAATAACTATAGGCGAAGGCAG 18047 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 | || | | ||||||||| | |||| || |||| ||| || |||||| | || Sbjct 18046 TTATCTAGGTTAATACTGACACTCAAAAACGAAGGCATGGGTAGCGAAAAGGATTTGGTA 17987 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAAT 339 |||| ||||||| || |||||| |||||| Sbjct 17986 CCCTTATAGTCCATGCAGTAAACTATGAAT 17957 Score = 80.6 bits (88), Expect = 6e-13 Identities = 219/330 (66%), Gaps = 4/330 (1%) Strand=Plus/Plus Query 13 AAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTAATACGTAGGGGGCTAGCGTTATCCG 72 ||| ||| || || | |||||||||||| ||||| ||||| ||||| |||||||| || Sbjct 52123 AAGTCCCAGCAAATTTCGTGCCAGCAGCTGCGGTTATACGAGAGGGGCAAGCGTTATTCG 52182 Query 73 GAATTACTGGGCGTAAAGGGTGCGT-AGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTATG 131 |||||||||||||| || | ||||| ||| |||||| | | || ||| Sbjct 52183 TCTTTACTGGGCGTAAAAAGTTTTTCAGGTGATTTTTTAAGTTGAATATTTAAATCTAAA 52242 Query 132 GCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGTGCAGGAGGGGCAAGTGGAA 191 |||||| | | | | | | ||| | | |||| | || | | ||| Sbjct 52243 GCTCAA-CTTTAGTCAATTATCAATACTAAAAAATTTGAGTATAACAGAAGATAACAGAA 52301 Query 192 TTCCTAGTGTAGCGGTGAAATGCG-TAGATATTAGGAGGAA-CACCAGTGGCGAAGGCGG 249 || ||||| || | |||| || | | ||||| | ||| || | ||||||||| | Sbjct 52302 TTTCTAGTTCAGGTTTAAAATCCGATTCAGATTAGAAAGAATAACTATAGGCGAAGGCAG 52361 Query 250 CTTGCTGGACTGTAACTGACACTGAGGCTCGAAAGCGTGGGGAGCAAACAGGATTAGATA 309 | || | | ||||||||| | |||| || |||| ||| || |||||| | || Sbjct 52362 TTATCTAGGTTAATACTGACACTCAAAAACGAAGGCATGGGTAGCGAAAAGGATTTGGTA 52421 Query 310 CCCTGGTAGTCCACGCCGTAAACGATGAAT 339 |||| ||||||| || |||||| |||||| Sbjct 52422 CCCTTATAGTCCATGCAGTAAACTATGAAT 52451 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203182577664