Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01002193.1 Length=560 Score E Sequences producing significant alignments: (Bits) Value seq1448 122 3e-25 >seq1448 Length=56290 Score = 122 bits (134), Expect = 3e-25 Identities = 126/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 36 ACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGG 95 |||||||| ||||||||||| ||||| |||| |||| |||||||| || ||| Sbjct 5319 ACCCGAAATCAAGTGATCTAACCATGAACAGGTTGAAAACAGGGTAACACTTGTTGAAGG 5378 Query 96 TCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAA 155 |||||| | |||||| || || ||||||| ||||| |||| |||||||||||| Sbjct 5379 ACCGAACTCGTGTATGTTGCAATATACTGGGATGATTTGTGGTTAGGAGTGAAAGGCTAA 5438 Query 156 ACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAG 200 |||||||| | |||||||||| ||| ||||| |||| | |||| Sbjct 5439 TCAAACTTGAAGATAGCTGGTTTTCTGCGAAATCTATAGAAGTAG 5483 Score = 122 bits (134), Expect = 3e-25 Identities = 126/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 36 ACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGG 95 |||||||| ||||||||||| ||||| |||| |||| |||||||| || ||| Sbjct 16449 ACCCGAAATCAAGTGATCTAACCATGAACAGGTTGAAAACAGGGTAACACTTGTTGAAGG 16390 Query 96 TCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAA 155 |||||| | |||||| || || ||||||| ||||| |||| |||||||||||| Sbjct 16389 ACCGAACTCGTGTATGTTGCAATATACTGGGATGATTTGTGGTTAGGAGTGAAAGGCTAA 16330 Query 156 ACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAG 200 |||||||| | |||||||||| ||| ||||| |||| | |||| Sbjct 16329 TCAAACTTGAAGATAGCTGGTTTTCTGCGAAATCTATAGAAGTAG 16285 Score = 122 bits (134), Expect = 3e-25 Identities = 126/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 36 ACCCGAAACCAAGTGATCTACCCATGGCCAGGATGAAGGTGCGGTAACACGCCCTGGAGG 95 |||||||| ||||||||||| ||||| |||| |||| |||||||| || ||| Sbjct 53958 ACCCGAAATCAAGTGATCTAACCATGAACAGGTTGAAAACAGGGTAACACTTGTTGAAGG 54017 Query 96 TCCGAACCCACTAATGTTGAAAAATTAGGGGATGAGCTGTGGGTAGGGGTGAAAGGCTAA 155 |||||| | |||||| || || ||||||| ||||| |||| |||||||||||| Sbjct 54018 ACCGAACTCGTGTATGTTGCAATATACTGGGATGATTTGTGGTTAGGAGTGAAAGGCTAA 54077 Query 156 ACAAACTTGGAAATAGCTGGTTCTCTCCGAAAACTATTTAGGTAG 200 |||||||| | |||||||||| ||| ||||| |||| | |||| Sbjct 54078 TCAAACTTGAAGATAGCTGGTTTTCTGCGAAATCTATAGAAGTAG 54122 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1689575534592