Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01002194.1 Length=319 Score E Sequences producing significant alignments: (Bits) Value seq1448 78.8 2e-12 >seq1448 Length=56290 Score = 78.8 bits (86), Expect = 2e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||| |||||||||| ||||||| | ||||||||||||| |||||||| |||||||| Sbjct 4876 GAATTGAAACATCTTAGTAGCTAAAAGAAAAGAAATCAAAAGAGATTCCGTTAGTAGTGG 4935 Query 231 CGAGCGAA 238 |||||||| Sbjct 4936 CGAGCGAA 4943 Score = 78.8 bits (86), Expect = 2e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Minus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||| |||||||||| ||||||| | ||||||||||||| |||||||| |||||||| Sbjct 16892 GAATTGAAACATCTTAGTAGCTAAAAGAAAAGAAATCAAAAGAGATTCCGTTAGTAGTGG 16833 Query 231 CGAGCGAA 238 |||||||| Sbjct 16832 CGAGCGAA 16825 Score = 78.8 bits (86), Expect = 2e-12 Identities = 58/68 (85%), Gaps = 0/68 (0%) Strand=Plus/Plus Query 171 GAACTGAAACATCTAAGTAGCTGCAGGAAAAGAAATCAACCGAGATTCCCAAAGTAGTGG 230 ||| |||||||||| ||||||| | ||||||||||||| |||||||| |||||||| Sbjct 53515 GAATTGAAACATCTTAGTAGCTAAAAGAAAAGAAATCAAAAGAGATTCCGTTAGTAGTGG 53574 Query 231 CGAGCGAA 238 |||||||| Sbjct 53575 CGAGCGAA 53582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 918386701568