Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Proteromonas_20lacertae_20[genbank_20GCA_5F002245135.1_202017-08-09] 1,448 sequences; 52,248,569 total letters Query= AAMG01002207.1 Length=564 Score E Sequences producing significant alignments: (Bits) Value seq1448 114 4e-23 >seq1448 Length=56290 Score = 114 bits (126), Expect = 4e-23 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Minus Query 275 CAATACCAAGCTATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCA 333 ||||| ||| | |||| ||||| | ||||||| |||||| | | |||| || Sbjct 6590 CAATATAAAGGTGTAGTAAAGGTGCATAGGGTCTTCGCGTCCTATCACAAGAAATCGGCG 6531 Query 334 TCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACG 393 | || || || ||||||||| | || |||| ||||||| ||| ||||||||| Sbjct 6530 TTTTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGTGGGGAAGTCGTTACA 6471 Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 |||||| |||||||| | | ||| | ||||||||||||||||||||||| | || | | Sbjct 6470 CCATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGTCAGTG 6411 Query 454 TTACCACCGCCGTTTACT 471 |||| | |||||||||| Sbjct 6410 TTACGGCTGCCGTTTACT 6393 Score = 114 bits (126), Expect = 4e-23 Identities = 145/198 (73%), Gaps = 1/198 (1%) Strand=Plus/Plus Query 275 CAATACCAAGCTATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCA 333 ||||| ||| | |||| ||||| | ||||||| |||||| | | |||| || Sbjct 15177 CAATATAAAGGTGTAGTAAAGGTGCATAGGGTCTTCGCGTCCTATCACAAGAAATCGGCG 15236 Query 334 TCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACG 393 | || || || ||||||||| | || |||| ||||||| ||| ||||||||| Sbjct 15237 TTTTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGTGGGGAAGTCGTTACA 15296 Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 |||||| |||||||| | | ||| | ||||||||||||||||||||||| | || | | Sbjct 15297 CCATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGTCAGTG 15356 Query 454 TTACCACCGCCGTTTACT 471 |||| | |||||||||| Sbjct 15357 TTACGGCTGCCGTTTACT 15374 Score = 111 bits (122), Expect = 5e-22 Identities = 145/198 (73%), Gaps = 2/198 (1%) Strand=Plus/Minus Query 275 CAATACCAAGCTATAGTGAAGGTCCCG-GGGTCTTTTCGTCCTGCCGCGCGAAACGAGCA 333 ||||| ||| | |||| ||||| | ||||||| |||||| | | |||| || Sbjct 55229 CAATATAAAGGTGTAGTAAAGGTGCATAGGGTCTTCGCGTCCTATCACAAGAAATCGGCG 55170 Query 334 TCTTTACTCGTACTGCAATTTCACCGGGCCTGTGGTTGAGACAGCAGGGGAGTCGTTACG 393 | || || || ||||||||| | || |||| ||||||| ||| ||||||||| Sbjct 55169 TTTTCACCGATATATCAATTTCACAAAGTCTATGGTGGAGACAGT-GGGAAGTCGTTACA 55111 Query 394 CCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTTATAG 453 |||||| |||||||| | | ||| | ||||||||||||||||||||||| | || | | Sbjct 55110 CCATTCATGCAGGTCAGTAATTAGCTGACAAGGAATTTCGCTACCTTAGAACCGTCAGTG 55051 Query 454 TTACCACCGCCGTTTACT 471 |||| | |||||||||| Sbjct 55050 TTACGGCTGCCGTTTACT 55033 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1702375349248