Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudo-
nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters
Query= AAMG01000304.1
Length=683
Score E
Sequences producing significant alignments: (Bits) Value
seq958 480 3e-133
>seq958
Length=1914
Score = 480 bits (532), Expect = 3e-133
Identities = 364/423 (86%), Gaps = 7/423 (2%)
Strand=Plus/Minus
Query 265 GGCCAGCATCAGCTCGGGCGGTCGGATAAAGGCCCCGGGAATGTGGCCCCCTTCGGGGGG 324
|||||||||||| | || || ||||||| || ||||||| || | |||| |
Sbjct 1825 GGCCAGCATCAGTTTTGGTGGCAGGATAAAT-CCATAGGAATGTAGCTTGCCTCGGTAAG 1767
Query 325 TGTTATAGCCCGGGGTGGAATGCGGCCCGCCTGGACTGAGGTCCGCGC--TCCGGCTAGG 382
| |||||||| | || |||| | ||| || ||||||||| | ||| | | | |||
Sbjct 1766 TATTATAGCCTGTGG--GAATACTGCCAGCTGGGACTGAGGACTGCGACGTAAGTCAAGG 1709
Query 383 ATGCTGGCGTAATGGTTGTAAGCGGCCCGTCTTGGAACACGGACCAAGGAGTCTAACATC 442
|||||||| |||||||| || || |||||||||| |||||||||||||||||||||| ||
Sbjct 1708 ATGCTGGCATAATGGTTATATGCCGCCCGTCTTGAAACACGGACCAAGGAGTCTAACGTC 1649
Query 443 TATGCGAGTGTTTGGGTGTCAAACCCGTGCGCGTAATGAAAGTGAACGGAGGTGGGAACC 502
||||||||||||||||||| |||||| | ||||||||||||||||||| |||| || ||
Sbjct 1648 TATGCGAGTGTTTGGGTGTAAAACCCATACGCGTAATGAAAGTGAACGTAGGTTGGGGCC 1589
Query 503 -CGTGAG-GGTGCACCATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 560
|| || ||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1588 TCGCAAGAGGTGCACAATCGACCGATCCTGATGTCTTCGGATGGATTTGAGTAAGAGCAT 1529
Query 561 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 620
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1528 AGCTGTTGGGACCCGAAAGATGGTGAACTATGCCTGAATAGGGTGAAGCCAGAGGAAACT 1469
Query 621 CTGGTGGAGGCTCGCAGCGGTTCTGGCGTGCAAATCGATCGTCAAATTTGGGTATAGGGG 680
|||||||||||||| |||||||||| ||||||||||||||||| ||||||||||||||||
Sbjct 1468 CTGGTGGAGGCTCGTAGCGGTTCTGACGTGCAAATCGATCGTCGAATTTGGGTATAGGGG 1409
Query 681 CGA 683
|||
Sbjct 1408 CGA 1406
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 2079976426450
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |