Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudo-
nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters
Query= AAMG01002199.1
Length=543
Score E
Sequences producing significant alignments: (Bits) Value
seq958 282 1e-73
seq11 150 6e-34
>seq958
Length=1914
Score = 282 bits (312), Expect = 1e-73
Identities = 156/156 (100%), Gaps = 0/156 (0%)
Strand=Plus/Plus
Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 1 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 60
Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct 61 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 120
Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543
||||||||||||||||||||||||||||||||||||
Sbjct 121 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 156
>seq11
Length=336136
Score = 150 bits (166), Expect = 6e-34
Identities = 143/180 (79%), Gaps = 12/180 (7%)
Strand=Plus/Minus
Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTC 239
|||| || |||||||| ||| || ||||| |||||||| || ||| || |||
Sbjct 290602 TCATGGAACAAGTAAAACAACATTACAAGTAGTTGTATTTCATGTGTGCCAAA---GCTT 290546
Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG---AGTCAAGCTCAA 296
|||||||||||||||||| |||||||||||||| || |||||| ||||||||||||
Sbjct 290545 CCACTTATTCTACACCTCATAAGTCATTTCACAACATCAGACTAGTAGAGTCAAGCTCAA 290486
Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC---CCGTTCC---CTTGGCTGTGGTTT 350
||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| ||
Sbjct 290485 CAGGGTCTTCTTTCCCCACTGATTCTTCCAAGCCTGCTGTTCCCTTCTTGGCTGTGGGTT 290426
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 1635182029152
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |