Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= AAMG01002199.1 Length=543 Score E Sequences producing significant alignments: (Bits) Value seq958 282 1e-73 seq11 150 6e-34 >seq958 Length=1914 Score = 282 bits (312), Expect = 1e-73 Identities = 156/156 (100%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 388 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 447 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1 ATCCATTCATGCGCGTCACTAATTAGATGACGAGGCATTTGGCTACCTTAAGAGAGTCAT 60 Query 448 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 507 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 61 AGTTACTCCCGCCGTTTACCCGCGCTTGGTTGAATTTCTTCACTTTGACATTCAGAGCAC 120 Query 508 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 543 |||||||||||||||||||||||||||||||||||| Sbjct 121 TGGGCAGAAATCACATTGCGTCAACATCACTTTCTG 156 >seq11 Length=336136 Score = 150 bits (166), Expect = 6e-34 Identities = 143/180 (79%), Gaps = 12/180 (7%) Strand=Plus/Minus Query 180 TCATTGATTAAGTaaaaaaaCGATAAGGGTAGTGGTATTTCACTTGCGCCGAAACGGCTC 239 |||| || |||||||| ||| || ||||| |||||||| || ||| || ||| Sbjct 290602 TCATGGAACAAGTAAAACAACATTACAAGTAGTTGTATTTCATGTGTGCCAAA---GCTT 290546 Query 240 CCACTTATTCTACACCTCTCAAGTCATTTCACAAAGTCGGACTAG---AGTCAAGCTCAA 296 |||||||||||||||||| |||||||||||||| || |||||| |||||||||||| Sbjct 290545 CCACTTATTCTACACCTCATAAGTCATTTCACAACATCAGACTAGTAGAGTCAAGCTCAA 290486 Query 297 CAGGGTCTTCTTTCCCCGCTGATTCCGCCAAGC---CCGTTCC---CTTGGCTGTGGTTT 350 ||||||||||||||||| ||||||| |||||| | ||||| ||||||||||| || Sbjct 290485 CAGGGTCTTCTTTCCCCACTGATTCTTCCAAGCCTGCTGTTCCCTTCTTGGCTGTGGGTT 290426 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1635182029152