Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudo- nitzschia_20multistriata_20[genbank_20GCA_5F900005105.1_202017-04-25] 1,099 sequences; 55,157,528 total letters Query= NC_027867.1 Length=651523 Score E Sequences producing significant alignments: (Bits) Value seq30 131 7e-25 >seq30 Length=255409 Score = 131 bits (144), Expect = 7e-25 Identities = 246/361 (68%), Gaps = 18/361 (5%) Strand=Plus/Plus Query 626204 TGGGAGGACTACTTTATGATGCTGGCCCTTCTCTCGGCCCAGCGCTCCAAGGACCCCAAC 626263 ||||||||||||||||||| | ||||| || |||||||||| || |||||||||| | Sbjct 114697 TGGGAGGACTACTTTATGAGCGTCGCCCTCCTGACGGCCCAGCGGTCGAAGGACCCCAGC 114756 Query 626264 ACTCAGGTCGGGGCCTGCATCGTCAACGAGGACAAGCGCGTCGTGTCTATGGGCTACAAC 626323 || ||||||||||||||||||||| ||| | || || |||| ||||||||||| Sbjct 114757 ACGCAGGTCGGGGCCTGCATCGTCGACGGCCAGAACCGGATCGTCGGCCTGGGCTACAAC 114816 Query 626324 GGCTTCCCGCGTGGCTGCAATGACGACGTCTTTCCTTGGAAGCGCGATAGCGCATGTGAG 626383 ||| | ||| ||| | |||||| || | || ||| | | | | ||| || Sbjct 114817 GGCATGCCGACCGGCCTGGACGACGACCTCATGCCGTGGGGGAGGGCCAACGC---CCAG 114873 Query 626384 GACATTCTCGACAGCAAGAGCCTCTATGTGGTTCACGCCGAACTCAACGCCATCCTCAAC 626443 | || || || |||| | |||| || |||||||| ||||||||||||||||| Sbjct 114874 GCCA---TCTTCAACAAGTACGTCTACGTCACCCACGCCGAGGTCAACGCCATCCTCAAC 114930 Query 626444 ----AAGAACGCCAAGTCT--------ATCAAGGGCTGCACTGTCTACGTCACTCTCTTT 626491 | || || | | || || || | || ||||||| || |||||| Sbjct 114931 AGCAAGGAGGGCTACGGCTCGCCGCGCGTCCGTGGGGGGACCCTCTACGTGACGCTCTTT 114990 Query 626492 CCATGTTGCGAATGTACCAAGGCCATCATCCAGTCTGGCATAACGCGCGTCGTCTACCTG 626551 || || | || |||||| || ||||||| ||||| | ||||||||||||| Sbjct 114991 CCGTGCGAGCACTGCACCAAGAAGGTCGTCCAGTCGGGCATCCGGGCCGTCGTCTACCTG 115050 Query 626552 G 626552 | Sbjct 115051 G 115051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 2084709128940002