Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01000140.1 Length=336 Score E Sequences producing significant alignments: (Bits) Value seq13665 376 5e-102 seq13487 342 1e-91 seq12131 298 1e-78 seq28801 291 2e-76 seq7661 215 1e-53 seq14778 205 2e-50 seq20637 203 6e-50 seq25055 199 8e-49 seq9863 192 1e-46 seq9360 185 2e-44 seq6100 176 9e-42 seq24473 170 4e-40 seq16235 158 2e-36 seq6297 138 2e-30 seq12158 91.5 3e-16 >seq13665 Length=1045 Score = 376 bits (416), Expect = 5e-102 Identities = 284/333 (85%), Gaps = 1/333 (0%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| |||||| |||||||||| |||||| ||| | | |||||||||||||||| || Sbjct 246 CCCGAACAGGGGAGTGAAATAGAACCTGAAACCGTGTACTTACAAGCGGTCGGAGCGGAC 305 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 ||| |||||||||||||||||||||||||||||||||||||| || | | || || Sbjct 306 AAGTTCCGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTCTTATCTGGCAAG 365 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 |||||| |||||||| || |||||||| ||||||||| || ||||||||| ||| Sbjct 366 GTTAAGTCCTTCAGGCACGC-AGCCGAAGCGAAAGCGAGTCTGAACAGGGCGCACAGTCA 424 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGC 243 | || | ||||||||||||||||||||||||||| | |||||||||| |||||||| | Sbjct 425 GAGGAGGTAGACGCGAAACCTTGTGATCTACCCATGGACAGGTTGAAGGTGCGGTAACAC 484 Query 244 GTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGT 303 || |||||||||||||||| ||||||||||||||||| |||||||| | |||||||||| Sbjct 485 GTAATGGAGGACCGAACCGATAAACGTTGAAAAGTTTCCGGATGACCTGAGGGTAGGGGT 544 Query 304 GAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 336 ||||||||||||||||||||||||||||||||| Sbjct 545 GAAAGGCCAATCAAACTGGGAAATAGCTCGTAC 577 >seq13487 Length=1059 Score = 342 bits (378), Expect = 1e-91 Identities = 272/326 (83%), Gaps = 1/326 (0%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| ||| | | |||||||||||||||| | || Sbjct 413 AGGGGAGTGAAATAGAACCTGAAACCGTGTACTTACAAGCGGTCGGAGCGTACAAGTTGC 354 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 |||||||||||||||||||||||||||||||||||||| || || | || |||||||| Sbjct 353 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTCTTCTCTGGCAAGGTTAAGT 294 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 ||||||||| || | |||||| ||||||||| || || |||||| ||| | | | Sbjct 293 GCTTCAGGCACGG-ATCCGAAGCGAAAGCGAGTCTGAATAGGGCGTATAGTCAGATGAGG 235 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||||||||||||||||||||||||| | |||||||||| |||||||| ||| ||| Sbjct 234 TAGACGCGAAACCTTGTGATCTACCCATGGACAGGTTGAAGGTGCGGTAACACGTACTGG 175 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 |||||||||||| ||||||||||||||||| ||||||| | ||||||||||||||||| Sbjct 174 AGGACCGAACCGATAAACGTTGAAAAGTTTCCGGATGATCTGTGGGTAGGGGTGAAAGGC 115 Query 311 CAATCAAACTGGGAAATAGCTCGTAC 336 ||||||||||||||||||||||||| Sbjct 114 TAATCAAACTGGGAAATAGCTCGTAC 89 >seq12131 Length=1185 Score = 298 bits (330), Expect = 1e-78 Identities = 266/328 (81%), Gaps = 4/328 (1%) Strand=Plus/Plus Query 10 CAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTC 69 || ||| ||||||||| |||||| ||| ||||||||||||||||||||| | | | Sbjct 130 CAAGGGAGTGAAATAGTACCTGAAACCGTACGCCTACAAGCGGTCGGAGCCTGGCG-TGG 188 Query 70 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 ||||||||||||||||||||||||||||||||||||||| ||| || || ||| |||| Sbjct 189 GGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAA-CGTTGCCGGCAAGGATAAG 247 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGC 188 | ||||| | || | ||| || ||||||||| || || |||||| | ||| || | Sbjct 248 TGGTTCAGCCACGG-ATCCGTAGCGAAAGCGAGTCTGAATAGGGCGCCATAGTCGGCAGT 306 Query 189 GCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGAT 248 | ||||||||||||| ||||||||||||| | ||||| ||||| | |||||| | | Sbjct 307 GTTAGACGCGAAACCGTGTGATCTACCCATGGGCAGGATGAAGCTGTGGTAACACACAGT 366 Query 249 GGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAG 308 ||||| |||||||||| |||||||||| |||||||||| | ||||||||||||||| Sbjct 367 GGAGGTCCGAACCGGTTGTCGTTGAAAAGACTTCGGATGACCTGTGGGTAGGGGTGAAAG 426 Query 309 GCCAATCAAACTGGGAAATAGCTCGTAC 336 |||||||||||||||| ||||||||||| Sbjct 427 GCCAATCAAACTGGGAGATAGCTCGTAC 454 >seq28801 Length=389 Score = 291 bits (322), Expect = 2e-76 Identities = 231/275 (84%), Gaps = 2/275 (1%) Strand=Plus/Plus Query 15 GGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCGGTGA 74 |||||||||||| |||||| ||| |||||||||||||||||||| || | |||| |||| Sbjct 111 GGGTGAAATAGAACCTGAAACCGTACGCCTACAAGCGGTCGGAGCAGATTAATTCTGTGA 170 Query 75 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGGGCTT 134 |||||||||||||||||||||||||||||||||| | | || ||||||||||||| ||| Sbjct 171 CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAATTTT-ACTAGCGAGGTTAAGGACTT 229 Query 135 CAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGCTAGA 194 |||| ||| ||||| || ||||||||| || || |||||| |||| || | |||| Sbjct 230 CAGGTCCGG-AGCCGGAGCGAAAGCGAGTCTGAATAGGGCGCATAGTTAGTAGGATTAGA 288 Query 195 CGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGGAGGA 254 ||||||||||||||||||||||| | ||||||||||| |||||| | ||||||| Sbjct 289 CGCGAAACCTTGTGATCTACCCATGGGCAGGTTGAAGCTTTGGTAACACAAAGTGGAGGA 348 Query 255 CCGAACCGGTAAACGTTGAAAAGTTTTCGGATGAC 289 |||||||||| |||||||||||| |||||||||| Sbjct 349 CCGAACCGGTTGACGTTGAAAAGTCTTCGGATGAC 383 >seq7661 Length=1873 Score = 215 bits (238), Expect = 1e-53 Identities = 249/332 (75%), Gaps = 10/332 (3%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||||||| |||||| ||| |||||||| | ||||||||| Sbjct 939 CCCGACGAGGGGAGTGAAATAGAACCTGAAACCGGATGCCTACAAACAGTCGGAGCCC-- 996 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | ||||||||||| ||||||| |||||| | | |||| ||||| || || ||| || Sbjct 997 -GCAAGGGTGACGGCGTACCTTTTGTATAATGGGTCAACGACTTAGT-GTAACGAGCAAG 1054 Query 124 GTTAAGGGCTTCAGGCCCGT-TAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTT 182 ||||| | || || ||| || || ||||||||| || || |||||| |||| Sbjct 1055 CTTAAG-----CCGGTAGGTGTAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGTTCAGTT 1109 Query 183 GGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 || || ||||| ||||||| |||||||| ||| ||||||| ||||| |||||| Sbjct 1110 CGTTGCATTAGACCCGAAACCGAGTGATCTAGCCATGAGCAGGCTGAAGGTTGGGTAACA 1169 Query 243 CGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 | |||||| ||||||| ||| |||| || || |||||||| | || |||||| Sbjct 1170 CCAACTGGAGGGCCGAACCCATAACTGTTGCAATAGTTCGGGATGACTTGTGGCTAGGGG 1229 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||||| |||||||||| || Sbjct 1230 TGAAAGGCCAATCAAACTCGGAAATAGCTGGT 1261 >seq14778 Length=957 Score = 205 bits (226), Expect = 2e-50 Identities = 180/222 (81%), Gaps = 2/222 (1%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| |||||| |||||| ||| |||||| ||| | || |||||||||||||||| || Sbjct 738 CCCGAACAGGGGAGTGAAA-AGAACCTGAAACCGTGTGCTTACAAGCGGTCGGAGCGGAT 796 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 ||| |||||||||||||||||||||||||||||||||||||| || | | || || Sbjct 797 CAGTTCCGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTACTCTTATCTGGCAAG 856 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTG 183 |||||| ||||||| || |||||||| ||||||||| || ||||||||| ||| Sbjct 857 GTTAAGTCCTTCAGGGACG-CAGCCGAAGCGAAAGCGAGTCTGAACAGGGCGCACAGTCA 915 Query 184 GTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGG 225 | | | |||||||||||||||||||||||||| | ||||| Sbjct 916 GGTGAGGTAGACGCGAAACCTTGTGATCTACCCTTGGGCAGG 957 >seq20637 Length=648 Score = 203 bits (224), Expect = 6e-50 Identities = 240/324 (74%), Gaps = 6/324 (2%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||||||| |||||| |||| || ||||||| || |||||||| | |||| Sbjct 410 AGGGGAGTGAAATAGATCCTGAAACCGCATGCATACAAGCAGTGGGAGCCGACTTGTTCG 351 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| | ||| ||||||||||| Sbjct 350 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTA-TATTCAGTAGCGAGGTTAACC 292 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || ||||| || |||| |||| ||||| |||||| ||||| ||| Sbjct 291 GTATAGGGG-----AGCCGTAGAGAAATCGAGTCTTAATAGGGCGTTTAGTTGCTGGGTA 237 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| | |||||| ||| ||||||||||||| |||||| | ||| Sbjct 236 TAGACCCGAAACCAGGCGATCTATCCATGAGCAGGTTGAAGGTTGGGTAACACTAACTGG 177 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| |||||||||| |||||||| | || |||||||||||||| Sbjct 176 AGGACCGAACCCACTGTCGTTGAAAAGCCAGGGGATGACTTGTGGATAGGGGTGAAAGGC 117 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 |||||| | || |||||| || Sbjct 116 TAATCAAGCCTGGTGATAGCTGGT 93 >seq25055 Length=493 Score = 199 bits (220), Expect = 8e-49 Identities = 242/325 (74%), Gaps = 6/325 (2%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||| || |||||| | | |||||||||| || |||||| | || | Sbjct 6 AGGGGAGTGAAACAGTACCTGAAACGGATTGCCTACAAGCAGTAGGAGCCTCTTTATGGG 65 Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||| |||||||||| | || || ||| | || | ||| || ||||| Sbjct 66 GTGACTGCGTACCTCTTGCATAATGGGTCTGTGACTTAAT-GTATCAAGCAAGCTTAAGC 124 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG-AGTTGGTGGCG 189 || ||| ||| || || ||||||||| || || |||||||| |||| | | Sbjct 125 CGTT-AGGTG---TAGGCGCAGCGAAAGCGAGTCTGAATAGGGCGACTTAGTTTGAAGTA 180 Query 190 CTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATG 249 ||||| ||||||| | |||||| || || |||| ||||| |||||||| || || Sbjct 181 TTAGACCCGAAACCCGGCGATCTATGCATGACCAGGATGAAGGTGCGGTAACACGCACTG 240 Query 250 GAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGG 309 |||| |||||||| | |||||||||||||| ||||||| | | | ||||||||||||| Sbjct 241 GAGGTCCGAACCGATTAACGTTGAAAAGTTACCGGATGAGTTGTGCTTAGGGGTGAAAGG 300 Query 310 CCAATCAAACTGGGAAATAGCTCGT 334 |||||||| | ||||||||||| || Sbjct 301 CCAATCAAGCCGGGAAATAGCTGGT 325 >seq9863 Length=1459 Score = 192 bits (212), Expect = 1e-46 Identities = 245/333 (74%), Gaps = 7/333 (2%) Strand=Plus/Plus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| |||||| || |||||| ||| |||||||||| || ||||| Sbjct 426 CCCGATGAGGGGAGTGAAACAGTACCTGAAACCGGTTGCCTACAAGCAGTGGGAGCATCT 485 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | | ||||| |||| ||| |||||||||| | || || ||||| || | ||| || Sbjct 486 TTAGGGTGTGACCGCGTACCTCTTGCATAATGGGTCTGTGACTTAGT-GTATCGAGCAAG 544 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACG--AGT 181 ||||| | ||| ||| ||||| ||||||||| || || |||||| | ||| Sbjct 545 CTTAAGCCGAT-AGGTG---TAGGCGAAGCGAAAGCGAGTCTGAATAGGGCGCCTCTAGT 600 Query 182 TGGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAAC 241 | | || ||||| ||||||| | |||||| || || |||||||||| | |||||| Sbjct 601 TCGATGCATTAGACCCGAAACCCGGCGATCTAGGCATGACCAGGTTGAAGGTGGGGTAAC 660 Query 242 GCGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGG 301 | ||||||||||||||| | || |||||||| || |||||||| | | | ||||| Sbjct 661 ACCCACTGGAGGACCGAACCGATCAATGTTGAAAAATTGTCGGATGAGTTGTGCTTAGGG 720 Query 302 GTGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||| | ||||||||||| || Sbjct 721 GTGAAAGGCCAATCAAGCCGGGAAATAGCTGGT 753 >seq9360 Length=1536 Score = 185 bits (204), Expect = 2e-44 Identities = 241/327 (74%), Gaps = 10/327 (3%) Strand=Plus/Plus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||| ||| |||||| || |||||||||| ||||||||| || || Sbjct 237 AGGGGAGTGAAACAGATCCTGAAATCGGAAGCCTACAAGCAGTCGGAGCCCCC--ATGCG 294 Query 71 G--TGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAA 128 | ||||||||| ||||||| |||||| | | ||| || | || | ||| || |||| Sbjct 295 GGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTCAT-GTGTCGAGCAAGCTTAA 353 Query 129 GGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGC 188 | || ||| ||| || || ||||||||| || || |||||| | |||| | | Sbjct 354 GCCGTT-AGGTG---TAGGCGCAGCGAAAGCGAGTCTGAATAGGGCGCCAAGTTCGACGT 409 Query 189 GCTA-GACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247 | ||| ||||||| |||||||| ||| ||||||| ||||| |||||| | Sbjct 410 ATGACGACCCGAAACCAGGTGATCTATCCATGAGCAGGATGAAGGTTGGGTAACACCAAC 469 Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 |||||| ||||||| || || |||||||| || | |||||||| | || ||||||||||| Sbjct 470 TGGAGGTCCGAACCCGTGAATGTTGAAAAATTCTGGGATGACTTGTGGATAGGGGTGAAA 529 Query 308 GGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||| ||| |||||| || Sbjct 530 GGCCAATCAAACCTGGACATAGCTGGT 556 >seq6100 Length=2287 Score = 176 bits (194), Expect = 9e-42 Identities = 244/330 (74%), Gaps = 15/330 (5%) Strand=Plus/Minus Query 11 AGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAGTGATTCG 70 ||||| |||||| ||| |||||| ||| | |||||||| || | || | | || | Sbjct 1447 AGGGGAGTGAAAAAGAACCTGAAACCGTATGTCTACAAGCAGTTGAAGACCCTT-ATGTG 1389 Query 71 GTGA-CGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAG 129 || | | |||||||| ||| | ||||| || ||||||| || || |||||||||||| Sbjct 1388 GTCAACAGCGTGCCTATTGAAGAATGAACCGGCGAGTTACA-GTAACTAGCGAGGTTAAG 1330 Query 130 GGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCG 189 | || | ||||| || ||||||||| ||||| ||||||| |||| || | Sbjct 1329 --CAGAAGATGTGG-AGCCGTAGCGAAAGCGAGTCTTAATAGGGCGAATAGTTAGTTGTT 1273 Query 190 CTAGACGCGAAACCTT-GTGATCTACCCACGAGCAGGTTGAAGTCGC-GGTAAC---GCG 244 ||||| ||||||| |||||||| ||| | |||||||||| ||| ||||| ||| Sbjct 1272 GTAGACCCGAAACCGCAGTGATCTATCCATGGCCAGGTTGAAG-CGCAGGTAAAATTGCG 1214 Query 245 TGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTG 304 || ||||||||||| || |||||||||||||||| ||||| | | || |||||||| Sbjct 1213 TG---GAGGACCGAACTCGTGAACGTTGAAAAGTTTTGAGATGAGTTGTGGATAGGGGTG 1157 Query 305 AAAGGCCAATCAAACTGGGAAATAGCTCGT 334 ||| ||||||| ||| ||| |||||| || Sbjct 1156 AAATGCCAATCGAACGCGGAGATAGCTGGT 1127 >seq24473 Length=513 Score = 170 bits (188), Expect = 4e-40 Identities = 197/264 (75%), Gaps = 6/264 (2%) Strand=Plus/Minus Query 71 GTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTAAGG 130 ||||| |||| ||||||| |||||| | | ||| ||| | |||| || ||||||| Sbjct 502 GTGACTGCGTACCTTTTGTATAATGGGTCAGCGACTTATT-GTCAGTGGCAAGGTTAACC 444 Query 131 GCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGGCGC 190 | | || ||||| || ||||||||| ||||| |||||| | ||| | |||| Sbjct 443 GTATAGGGG-----AGCCGTAGCGAAAGCGAGTCTTAATAGGGCGTCTAGTCGCTGGCAA 389 Query 191 TAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGATGG 250 ||||| ||||||| | |||||| ||| | ||||||||||| | |||||| | | ||| Sbjct 388 TAGACCCGAAACCCGGCGATCTATCCATGTGCAGGTTGAAGGTGAGGTAACACTTACTGG 329 Query 251 AGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAAGGC 310 ||||||||||| ||| |||||||| ||| ||||||| | || |||||||||||||| Sbjct 328 AGGACCGAACCCACAAATGTTGAAAAATTTGGGGATGACGTGTGGATAGGGGTGAAAGGC 269 Query 311 CAATCAAACTGGGAAATAGCTCGT 334 |||||| | |||| ||| || || Sbjct 268 TAATCAAGCCGGGAGATATCTGGT 245 >seq16235 Length=863 Score = 158 bits (174), Expect = 2e-36 Identities = 237/332 (71%), Gaps = 6/332 (2%) Strand=Plus/Minus Query 4 CCCGAGCAGGGGGGTGAAATAGACCCTGAACCCGCGCGCCTACAAGCGGTCGGAGCCGAG 63 ||||| ||||| ||||||||| |||||| ||| |||||||| | ||||||||| Sbjct 602 CCCGACGAGGGGAGTGAAATAGCACCTGAAACCGGATGCCTACAAACAGTCGGAGCCTCC 543 Query 64 TGATTCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAG 123 | | ||||||||||| ||||||| |||||| | | ||| ||| ||| |||| || Sbjct 542 TTGTGGGGTGACGGCGTACCTTTTGTATAATGGGTCAGCGACTTA-CAGTCGGCAGCAAG 484 Query 124 GTTAAGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCG-ACGAGTT 182 |||| ||| || | || || || ||||||||| || || |||||| |||| Sbjct 483 CTTAA-GGCGATAG---CTGGAGGCGTAGCGAAAGCGAGTCTGAATAGGGCGCTTTAGTT 428 Query 183 GGTGGCGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACG 242 | || ||||| |||||||| ||||||| ||| | |||||||||| || ||||| Sbjct 427 GCCGGTTGTAGACCCGAAACCTGATGATCTAGCCATGGCCAGGTTGAAGGTGCAGTAACA 368 Query 243 CGTGATGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGG 302 | ||||||||||||| |||||||| | ||||| | || |||||| Sbjct 367 TGCACTGGAGGACCGAACTCACGCCTGTTGAAAAAGTCGGAGATGAGCTGTGGCTAGGGG 308 Query 303 TGAAAGGCCAATCAAACTGGGAAATAGCTCGT 334 |||||||||||||||| |||||||||| || Sbjct 307 TGAAAGGCCAATCAAATCAGGAAATAGCTGGT 276 >seq6297 Length=2229 Score = 138 bits (152), Expect = 2e-30 Identities = 84/89 (94%), Gaps = 0/89 (0%) Strand=Plus/Plus Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 ||||||||||||||| ||||||||||||||||| |||||||| | |||||||||||||| Sbjct 1 TGGAGGACCGAACCGATAAACGTTGAAAAGTTTCCGGATGACCTGAGGGTAGGGGTGAAA 60 Query 308 GGCCAATCAAACTGGGAAATAGCTCGTAC 336 ||||||||||||||||||||||||||||| Sbjct 61 GGCCAATCAAACTGGGAAATAGCTCGTAC 89 >seq12158 Length=1183 Score = 91.5 bits (100), Expect = 3e-16 Identities = 212/312 (68%), Gaps = 11/312 (4%) Strand=Plus/Minus Query 13 GGGGGTGAAATAGACCCTGAACCCGCGC---GCCTACAAGCGGTCGGAGCCGA--GTGAT 67 ||| |||||||||| | |||| ||| || || ||||| || |||| || ||||| Sbjct 1147 GGGAGTGAAATAGAACGTGAAACCGTGCTGAGCTCCCAAGCAGTGGGAGGAGAAAGTGAT 1088 Query 68 TCGGTGACGGCGTGCCTTTTGCATAATGAGCCTACGAGTTAGTCGTCACCAGCGAGGTTA 127 | |||| |||||||| ||| | |||||||| ||| ||| | | || || ||||| Sbjct 1087 -CTCTGACCGCGTGCCTGTTGAAGAATGAGCCGGCGACTTA-TAGGCAGTGGCTTGGTTA 1030 Query 128 AGGGCTTCAGGCCCGTTAGCCGAAGTGAAAGCGAGCCTTAACAGGGCGACGAGTTGGTGG 187 |||| | ||| ||||| || || |||||| ||| | |||| | || || Sbjct 1029 AGGGAACCCA--CCGG-AGCCGTAGCGAGAGCGAGTCTTCATGGGGCAATT-GTCACTGC 974 Query 188 CGCTAGACGCGAAACCTTGTGATCTACCCACGAGCAGGTTGAAGTCGCGGTAACGCGTGA 247 | ||| |||| | |||||||| ||| || |||| ||||| ||| | | Sbjct 973 TTATGGACCCGAACCTGGGTGATCTATCCATGACCAGGATGAAGCTTGGGTGAAACTAAG 914 Query 248 TGGAGGACCGAACCGGTAAACGTTGAAAAGTTTTCGGATGACTCGCGGGTAGGGGTGAAA 307 |||||| |||||||| | |||||||| | ||||||| | | || ||||||||||| Sbjct 913 TGGAGGTCCGAACCGACTGATGTTGAAAAATCAGCGGATGAGTTGTGGTTAGGGGTGAAA 854 Query 308 GGCCAATCAAAC 319 |||| || ||| Sbjct 853 TGCCACTCGAAC 842 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 972454276608