Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01000357.1 Length=131 Score E Sequences producing significant alignments: (Bits) Value seq25547 123 2e-26 >seq25547 Length=479 Score = 123 bits (136), Expect = 2e-26 Identities = 106/131 (81%), Gaps = 0/131 (0%) Strand=Plus/Minus Query 1 CTGGCGACCCTGCAGGGCTTCAGCATCGGTATCGCCCGCTAGTCGCCCAACTGGATGGTC 60 ||||| ||| | | |||||| ||||||| |||| ||| |||||| ||||||||| || Sbjct 135 CTGGCTACCTTCCTCGGCTTCGTCATCGGTGTCGCGCGCCTGTCGCCGAACTGGATGATC 76 Query 61 AACAAGCTGGCGACTGTCTACGTCGAGGTGTTCCGTAACATCCCGCCGCTGTTGCAGATC 120 | ||||||||| || || ||| ||||| | ||||| |||||||||||| || ||||||| Sbjct 75 AGCAAGCTGGCCACCGTGTACATCGAGATCTTCCGCAACATCCCGCCGTTGCTGCAGATT 16 Query 121 CTGTTCTGGTA 131 || |||||||| Sbjct 15 CTCTTCTGGTA 5 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 323092316830