Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01000636.1 Length=426 Score E Sequences producing significant alignments: (Bits) Value seq10295 453 3e-125 seq19173 304 3e-80 seq6297 280 4e-73 seq14940 228 2e-57 seq1161 212 2e-52 seq9689 185 2e-44 seq20727 183 8e-44 seq6100 178 3e-42 seq17759 158 3e-36 seq9360 149 2e-33 seq19758 140 8e-31 seq30999 105 2e-20 seq19422 104 6e-20 seq598 91.5 4e-16 seq22240 82.4 2e-13 seq18625 78.8 2e-12 >seq10295 Length=1395 Score = 453 bits (502), Expect = 3e-125 Identities = 356/419 (85%), Gaps = 15/419 (4%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| | | |||||||||||| ||||||| ||| ||||||| || | |||||||| Sbjct 1278 CGCGGGGAGATTGCATCTTCACAAACATTTCAACTTCGCTGAGTCCCGAGAGGAGACAGT 1219 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | |||||||||||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct 1218 GTGGCCATCGTTACGCCATTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1159 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| |||||||||||||||||| ||| |||| ||||||||||| || Sbjct 1158 TTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGACTTCAATCAAGAGCTT-GC---- 1104 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 ||||||||| |||| ||||| ||||||||||||||||||||||||||||||||||| Sbjct 1103 ----ACCCCATCATTTAATCTTCCAGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 1048 Query 241 TCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGACC 300 ||||||||||||||||||||||||||| |||||||||||||| ||| | || | ||| Sbjct 1047 TCGTGTTTGCAGAGTGCTGTGTTTTTATTAAACAGTCGCAGCCACCTTTTCACTGCAACC 988 Query 301 GGCATGA-GCTTACGGAGCAAGTC-CTTCACCCTCACC--GGCGCACCTTCTCCCGAAGT 356 ||| | |||| ||||||||| || || | | ||| |||||||||||||||||||| Sbjct 987 -CCATCACGCTTCGTGAGCAAGTCACTACA-CGTTACCGGGGCGCACCTTCTCCCGAAGT 930 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTC 415 |||||||| |||||| ||||||||| |||| ||||||||||||||||| | |||||| Sbjct 929 TACGGTGCTAATTTGCCGAGTTCCTTCTCCCGGGTTCTCTCAAGCGCCTTAGAATTCTC 871 >seq19173 Length=713 Score = 304 bits (336), Expect = 3e-80 Identities = 320/422 (76%), Gaps = 27/422 (6%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || | |||||||||| | || ||||||||| ||||||| | ||||||||| Sbjct 546 CGCGGGAACCCCGCATCTTCACGGGGAATTCAATTTCGCTGAGTCGGTGTTGGAGACAGT 487 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 | | ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 486 GGGGAAGTCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 427 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTA 180 ||||||||||||| ||||||||||||||||||||||||||| || || |||| || Sbjct 426 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCAATTCAGTGCTT-GC---- 372 Query 181 GCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTT 240 || || | |||||||||||||||||||||||||||| |||||||||||| ||| Sbjct 371 ----ACACCTCCTTTTAACCTTCCGGCACCGGGCAGGCGTCAGACCCTATACGTCGCCTT 316 Query 241 TCGTG--TTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGA 298 ||| || |||||| |||||||||| ||||||||||| | |||||| | | Sbjct 315 GTGTGGCTTCGCAGAGCCCTGTGTTTTTGGTAAACAGTCGCTACCCCCTGGTTTGTGTCC 256 Query 299 CCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCAC-CTTCTCCCGAAGTT 357 || || | || | || || ||| || | ||| |||||||||| Sbjct 255 CCCGCCCCTGGTTGCCCAGAAA---------------CGGGGCTCGCTTATCCCGAAGTT 211 Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417 ||| |||||| ||||||||| | |||||||||||||||||||||| ||||| Sbjct 210 ACGCGAGTAATTTGCCGAGTTCCTTCAACACCGTTCTCTCAAGCGCCTTGGTATACTCTA 151 Query 418 CC 419 || Sbjct 150 CC 149 >seq6297 Length=2229 Score = 280 bits (310), Expect = 4e-73 Identities = 317/424 (75%), Gaps = 32/424 (8%) Strand=Plus/Minus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60 |||| || | || ||||||| | | ||||||||| ||| ||| || |||||||| Sbjct 1302 GCGGGTAACCGGCGTCTTCACCGATACCACAATTTCACCGAG-CTCATGGCTGAGACAGC 1244 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||| Sbjct 1243 GCCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 1184 Query 121 TTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT- 179 ||||||||||||| |||||||||||||||||||||||||||||| | ||||||| || Sbjct 1183 TTAGGACCGTTATAGTTACGGCCGCCGTTTACCGGGGCTTCGATTCAATGCTTCGCCTTG 1124 Query 180 -AGCTAAC--CCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCC 236 ||||| ||| || ||||||||||||||||||||||| |||| || |||||||| Sbjct 1123 CGACTAACATCCCCTC--TTAACCTTCCGGCACCGGGCAGGTGTCAGGCCTTATACGTCA 1066 Query 237 ACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTC 296 ||| || |||||| || ||||||||| ||||||||||| ||||| | || | Sbjct 1065 TCTTGCGATTTTGCAAAGCCATGTGTTTTTGTTAAACAGTCGCCTGGGCCTTTTCACTGC 1006 Query 297 GACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGT 356 | | | ||| ||| || |||| |||||||||||||| Sbjct 1005 GGCTGACAT-TGCT-----------------------GCCAGCGCCCCTTCTCCCGAAGT 970 Query 357 TACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCT 416 ||| | ||| ||||||| |||||||| || ||| ||| ||| |||| | || |||| Sbjct 969 TACAGGGCCATTTTGCCGAGTTCCTTAGCCATGATTCACTCGAGCACCTTAGAATCCTCT 910 Query 417 ACCC 420 ||| Sbjct 909 TCCC 906 >seq14940 Length=947 Score = 228 bits (252), Expect = 2e-57 Identities = 215/268 (80%), Gaps = 6/268 (2%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGCGCCGCCA-TCG 70 |||||||||| | | | ||||||||| | | |||| || |||||||| | || | || Sbjct 946 GCATCTTCACCGATACTACAATTTCACCGGG-CTCGCGGAGGAGACAGTGT-GCAACTCA 889 Query 71 TTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 130 || ||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct 888 TTCTACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGT 829 Query 131 TATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT--AGCTAACCC 188 ||| |||||||||||||||||| |||||||| ||| |||||| | || | ||| | Sbjct 828 TATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAGGAGCTTTGGCTTGCGCCGAACAC 769 Query 189 CATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTT 248 | | |||||||||| |||||||||||| ||| | |||||| || |||||| ||| Sbjct 768 CCTTCCTTAACCTTCCAGCACCGGGCAGGTATCAGGCTCTATACTTCATCTTTCGATTTT 709 Query 249 GCAGAGTGCTGTGTTTTTAATAAACAGT 276 |||| | |||||||||| |||||||| Sbjct 708 GCAGGGCCCTGTGTTTTTGTTAAACAGT 681 >seq1161 Length=8540 Score = 212 bits (234), Expect = 2e-52 Identities = 209/268 (78%), Gaps = 9/268 (3%) Strand=Plus/Minus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGTT 72 |||||||||| | | ||||| |||||||||| | ||||||||||| | ||||| Sbjct 7071 GCATCTTCACGGATAATTCAAATTCACTGAGTTTATATTGGAGACAGCGGGGATGTCGTT 7012 Query 73 ACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTTA 132 || |||||| |||||||||||||||||||||||||||||||||||||||||||||||| | Sbjct 7011 ACACCATTCATGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTCA 6952 Query 133 TTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCATC 192 |||||||||||||||||| ||| |||| || | |||| | | | || | Sbjct 6951 GAGTTACGGCCGCCGTTTACTGGGACTTCTATTTA-----ATGCGTAAAC-ATTTCCTT- 6899 Query 193 AATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAG 252 |||| ||||| |||||||||||| |||| ||||||||| || || | || |||| Sbjct 6898 --TTAATCTTCCAGCACCGGGCAGGTGTCAGACCCTATACATCATGTTACCATTTAGCAG 6841 Query 253 AGTGCTGTGTTTTTAATAAACAGTCGCA 280 ||| || ||||||| |||||||||||| Sbjct 6840 AGTCCTAAGTTTTTATTAAACAGTCGCA 6813 >seq9689 Length=1487 Score = 185 bits (204), Expect = 2e-44 Identities = 171/213 (80%), Gaps = 4/213 (2%) Strand=Plus/Plus Query 13 GCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGCGCCGCCATCGT 71 ||||||| || | | ||||||| | |||| ||| ||| ||||||| | |||| Sbjct 1274 GCATCTTTACTCGTAATGCAATTTCGCCGAGT-TCGCGGTTGAGACAGTTGGGAAGTCGT 1332 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| Sbjct 1333 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGATGGTT 1392 Query 132 ATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTT--AGCTAACCCC 189 || ||||| ||||||||||| ||||||| || |||||||| || ||||||| Sbjct 1393 ATAGTTACCACCGCCGTTTACTGGGGCTTAAATTCTCAGCTTCGCCTTGCGGCTAACCGG 1452 Query 190 ATCAATTAACCTTCCGGCACCGGGCAGGCGTCA 222 | |||||||||| ||||||||||||||||| Sbjct 1453 TCCTCTTAACCTTCCAGCACCGGGCAGGCGTCA 1485 >seq20727 Length=644 Score = 183 bits (202), Expect = 8e-44 Identities = 155/191 (81%), Gaps = 0/191 (0%) Strand=Plus/Plus Query 115 GCTACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTC 174 ||||||||||||||||||| |||||||||||||||||| |||||||| |||| ||||| Sbjct 1 GCTACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAGTCAAACGCTTC 60 Query 175 GCGTTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGT 234 || | |||||| || | |||||||||| |||||||||||| |||| ||||||||| Sbjct 61 GCTTACGCTAACGCCCTTCCTTAACCTTCCAGCACCGGGCAGGTGTCAGACCCTATACAG 120 Query 235 CCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCT 294 | |||||| || ||||||| |||||||||| |||||||||||| ||||| | || Sbjct 121 CATCTTTCGATTTAGCAGAGTCCTGTGTTTTTGATAAACAGTCGCCTGGGCCTCTTCACT 180 Query 295 TCGACCGGCAT 305 || || |||| Sbjct 181 GCGGCCAGCAT 191 >seq6100 Length=2287 Score = 178 bits (196), Expect = 3e-42 Identities = 226/308 (73%), Gaps = 6/308 (2%) Strand=Plus/Plus Query 118 ACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCG 177 |||||||||||||||| |||||||||||||||||| |||||||| || | | ||||| Sbjct 1 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCACACCTTCGAC 60 Query 178 TTAG--CTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTC 235 || |||| | | | |||||||||| |||||||||||| |||| |||||||||| Sbjct 61 TTGCGTCTAAGCACTCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGCACCTATACGTC 120 Query 236 CACTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTT 295 |||||| || |||| |||||||| | ||||||||||| ||||| || ||| Sbjct 121 AGCTTTCGCTTTAGCAGGCACCTGTGTTTGTGGTAAACAGTCGCTTGGGCCTAGTTTCTG 180 Query 296 CGACCGGCATGAGCTTA---CGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCG 352 || || | |||| | || ||| | | ||||| | ||| | |||||||||| Sbjct 181 CGGCCCCCCATAGCTCAGATCGTTTCAAAT-CATCACCTAAAGGGGCTCCCCTTCTCCCG 239 Query 353 AAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATT 412 ||||||||| | | ||||||| |||||||| | | ||| || | || |||| | ||| Sbjct 240 AAGTTACGGGGACATTTTGCCGAGTTCCTTAACGAGGGTTTTCCCGCGCACCTTAGGATT 299 Query 413 CTCTACCC 420 |||| ||| Sbjct 300 CTCTCCCC 307 >seq17759 Length=779 Score = 158 bits (174), Expect = 3e-36 Identities = 220/309 (71%), Gaps = 26/309 (8%) Strand=Plus/Plus Query 118 ACCTTAGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCG 177 |||||||||||||||| |||||||||||||||||| |||||||| || | ||||| | Sbjct 1 ACCTTAGGACCGTTATAGTTACGGCCGCCGTTTACTGGGGCTTCAATTCAATGCTTCTCC 60 Query 178 TTAGCTAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCA 237 || |||| | | |||||||||| |||||||||||| |||| |||||||| || Sbjct 61 GAAGATAACATCTCCTCTTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACTTCAT 120 Query 238 CTTTCGTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCG 297 ||| || ||||||||| |||||||||| |||||||||||| | || ||||| Sbjct 121 CTTACGATTTTGCAGAGCCCTGTGTTTTTGATAAACAGTCGCCTGGACC-----TCTTC- 174 Query 298 ACCGGCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTT 357 || || | || || || || | |||| | ||||||||||||| Sbjct 175 AC-----TGCG--------GCCAG-------CCTTCGCTGGCGACCTTTCTCCCGAAGTT 214 Query 358 ACGGTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTA 417 || | | ||||||||| |||||| || |||||| ||| |||| | ||||||| Sbjct 215 ACAGGTCTATTTTGCCTAATTCCTTAGCCATGAATCTCTCGAGCACCTTAGGATTCTCTC 274 Query 418 CCCAACCAC 426 | |||| || Sbjct 275 CTCAACTAC 283 >seq9360 Length=1536 Score = 149 bits (164), Expect = 2e-33 Identities = 220/306 (72%), Gaps = 28/306 (9%) Strand=Plus/Minus Query 123 AGGACCGTTATTGTTACGGCCGCCGTTTACCGGGGCTTCGATCAAGAGCTTCGCGTTAGC 182 ||||||||||| ||||||||||||||||||| ||||||| || | ||| || | Sbjct 1536 AGGACCGTTATAGTTACGGCCGCCGTTTACCTGGGCTTC-----AGTTCGACGCTTTCAC 1482 Query 183 TAACCCCATCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTC 242 | | || | ||||||||| |||||||||||||||||| |||||||||||| || | Sbjct 1481 -ATCTCCCT---TTAACCTTCAGGCACCGGGCAGGCGTCAGACCCTATACGTCGCATTGC 1426 Query 243 GTGTTTGCAGAGTGCTGTGTTTTTAATAAACAGTCGCAGCGGCCTGGTATCTTCGAC-CG 301 || |||||| |||||||||| ||||||||||| | ||||| | | | || | Sbjct 1425 TGCTTCGCAGAGCCCTGTGTTTTTGCTAAACAGTCGCTACCCCCTGGCTTGTGCCACTCA 1366 Query 302 GCATGAGCTTACGGAGCAAGTCCTTCACCCTCACCGGCGCACCTTCTCCCGAAGTTACG- 360 | | ||||| || | || |||| ||| | ||||||||||| Sbjct 1365 GTCT-AGCTTGCG--CTAGGTGAGTCAC-------------GCTTATTCCGAAGTTACGC 1322 Query 361 GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCGCCTTGGTATTCTCTACCC 420 ||| | |||||| ||||||||| | ||||||||||||||||||||||| ||||||| Sbjct 1321 GTG-CAATTTGCCGAGTTCCTTCAGCATAGTTCTCTCAAGCGCCTTGGTATACTCTACCT 1263 Query 421 AACCAC 426 ||||| Sbjct 1262 GACCAC 1257 >seq19758 Length=685 Score = 140 bits (154), Expect = 8e-31 Identities = 106/125 (85%), Gaps = 0/125 (0%) Strand=Plus/Minus Query 1 CGCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGC 60 ||||| || |||||||||||||| ||||||||||||| | ||| | || ||||||| Sbjct 125 CGCGGGTAACCTGCATCTTCACAGGTATTTCAATTTCACCGGGTCCCTCGTTGAGACAGT 66 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 120 ||| ||||||| || ||||||| |||||||||||||||||||||||||||||||||| Sbjct 65 GCCCAAGTCGTTACACCTTTCGTGCGGGTCGGAACTTACCCGACAAGGAATTTCGCTACC 6 Query 121 TTAGG 125 ||||| Sbjct 5 TTAGG 1 >seq30999 Length=333 Score = 105 bits (116), Expect = 2e-20 Identities = 92/112 (82%), Gaps = 2/112 (2%) Strand=Plus/Plus Query 2 GCGGATACACTGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCG-GGTGGAGACAGC 60 |||| || || |||||||||| | | | ||||||||| ||| ||| || ||||||| Sbjct 223 GCGGGTAAACGGCATCTTCACCGTTACTACAATTTCACCGAG-CTCATGGCTGAGACAGT 281 Query 61 GCCGCCATCGTTACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 112 | | |||||||| ||||||||||||||||||||||||||||||||||||| Sbjct 282 GTCCAGATCGTTACACCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATT 333 >seq19422 Length=701 Score = 104 bits (114), Expect = 6e-20 Identities = 74/85 (87%), Gaps = 0/85 (0%) Strand=Plus/Plus Query 195 TTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAG 254 |||||||||| |||||||||||| |||| ||||||||||| |||||||| || |||||| Sbjct 3 TTAACCTTCCAGCACCGGGCAGGTGTCAGGCCCTATACGTCAACTTTCGTTTTGGCAGAG 62 Query 255 TGCTGTGTTTTTAATAAACAGTCGC 279 |||||||||| ||||||||||| Sbjct 63 CCCTGTGTTTTTGCTAAACAGTCGC 87 >seq598 Length=13668 Score = 91.5 bits (100), Expect = 4e-16 Identities = 188/273 (69%), Gaps = 10/273 (4%) Strand=Plus/Plus Query 12 TGCATCTTCACAGCGATTTCAATTTCACTGAGTCTCGGGTGGAGACAGCGCCGCCATCGT 71 |||||||||||| | |||||||||||| | | |||||| || ||| Sbjct 3558 TGCATCTTCACAAAAAATTCAATTTCACTAAAAAAATATTCAAGACAGTAGGGCGGGCGT 3617 Query 72 TACGCCATTCGTGCAGGTCGGAACTTACCCGACAAGGAATTTCGCTACCTTAGGACCGTT 131 || || ||| | | | ||||||||||||| ||| | ||| ||||||||||||||||| Sbjct 3618 TATACCTTTCATACTAGACGGAACTTACCCGCCAACGGATTACGCTACCTTAGGACCGTC 3677 Query 132 ATTGTTACGGCCGCCGTTTACC-GGGGCTTCGATCAAGAGCTTCGCGTTAGCTAACCCCA 190 | ||||| |||||||||| || | || | ||||| |||| | | ||| Sbjct 3678 AGAGTTACAGCCGCCGTTTTCCAGTGGTTATAATCAA-TGCTT----TCA--CAACATTT 3730 Query 191 TCAATTAACCTTCCGGCACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGT-GTTTG 249 | ||| | | | ||||||||| ||| ||||||||| | | ||| | |||| Sbjct 3731 TTTTTTAGCAACACAGAGCCGGGCAGGTCTCAAACCCTATAC-TTAATATTCATATTTTG 3789 Query 250 CAGAGTGCTGTGTTTTTAATAAACAGTCGCAGC 282 |||||| |||||||||| ||||||||||| || Sbjct 3790 CAGAGTTTTGTGTTTTTATTAAACAGTCGCCGC 3822 >seq22240 Length=588 Score = 82.4 bits (90), Expect = 2e-13 Identities = 66/77 (86%), Gaps = 2/77 (3%) Strand=Plus/Plus Query 344 CTTCTCCCGAAGTTACG-GTGCCTTTTTGCCTAGTTCCTTCCCCCGAGTTCTCTCAAGCG 402 ||| ||||||||||||| ||| | |||||| ||||||||| | |||||||||||||| Sbjct 81 CTTATCCCGAAGTTACGCGTG-CAATTTGCCGAGTTCCTTCAACATAGTTCTCTCAAGCG 139 Query 403 CCTTGGTATTCTCTACC 419 ||||||||| ||||||| Sbjct 140 CCTTGGTATACTCTACC 156 >seq18625 Length=738 Score = 78.8 bits (86), Expect = 2e-12 Identities = 147/219 (67%), Gaps = 23/219 (11%) Strand=Plus/Plus Query 208 ACCGGGCAGGCGTCACACCCTATACGTCCACTTTCGTGTTTGCAGAGTGCTGTGTTTTTA 267 |||||||||| |||| || ||||| || |||||| || ||| || | ||||||| Sbjct 1 ACCGGGCAGGTGTCAGGCCTTATACTTCATCTTTCGATTTCGCAAAGCCATATGTTTTTG 60 Query 268 ATAAACAGTCGCAGCGGCCTGGTATCTTCGACCGGCATGAGCTTACGGAGCAAGTCCTTC 327 ||||||||||| ||||| | || || | || ||| || || Sbjct 61 CTAAACAGTCGCCTGGGCCTTTTCACTGCGGC-----TGCTCTTGCG-----AG------ 104 Query 328 ACCCTCACCGGCGCACCTTCTCCCGAAGTTACGGTGCCTTTTTGCCTAGTTCCTTCCCCC 387 || |||| ||||||||||||||||| | ||| ||||||| |||||||| || Sbjct 105 -------CCAGCGCCCCTTCTCCCGAAGTTACAGGGCCATTTTGCCGAGTTCCTTAGCCA 157 Query 388 GAGTTCTCTCAAGCGCCTTGGTATTCTCTACCCAACCAC 426 ||| ||| ||| |||| | ||||||| | | ||||| Sbjct 158 TGATTCACTCGAGCACCTTAGGATTCTCTCCTCGACCAC 196 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1260351924288