Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01001250.1 Length=167 Score E Sequences producing significant alignments: (Bits) Value seq9325 89.7 4e-16 >seq9325 Length=1542 Score = 89.7 bits (98), Expect = 4e-16 Identities = 79/95 (83%), Gaps = 3/95 (3%) Strand=Plus/Minus Query 1 TCGACCCTAACCTGTGCACCCAGTGCGTCGGTCACTACGACGAACCGCAGAGCCAGCAGG 60 ||||||| |||||||||||| | ||||| || |||||||||||||| ||| ||||||||| Sbjct 102 TCGACCCCAACCTGTGCACCGAATGCGTGGGCCACTACGACGAACCACAGTGCCAGCAGG 43 Query 61 TATCGCCCGGTGGATTCGCATTTCCGCTGGACGAG 95 | | ||||||| || | ||| | || || |||||| Sbjct 42 TCT-GCCCGGTTGACT-GCA-TCCCCCTCGACGAG 11 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 435050167576