Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq20637 491 1e-136 seq16235 349 9e-94 seq7661 340 4e-91 seq9863 324 3e-86 seq9360 322 1e-85 seq35524 316 5e-84 seq28801 279 1e-72 seq13487 271 2e-70 seq24473 264 3e-68 seq13665 250 6e-64 seq6100 221 3e-55 seq12131 205 2e-50 seq25055 192 1e-46 seq14778 183 8e-44 seq31894 123 6e-26 seq12158 122 2e-25 seq24409 95.1 3e-17 seq28510 93.3 1e-16 seq7652 75.2 3e-11 >seq20637 Length=648 Score = 491 bits (544), Expect = 1e-136 Identities = 367/417 (88%), Gaps = 10/417 (2%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || ||||||| ||||| || || ||||| ||||| ||| ||||||||||||||||||| Sbjct 127 CCTATCCACAAGTCATCCC-CTGGCTTTT-CAACGACAGTGGGTTCGGTCCTCCAGTTAG 184 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||||||||||| |||||||| ||| |||||||||||| ||||| ||||||||| | Sbjct 185 T-GTTACCCAACCTT-CAACCTGCTCAT-GGATAGATCGCCTGGTTT-CGGGTCTATA-C 239 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 ||||| |||| |||||||| ||||||||| ||| | ||||| ||||||||| ||||||| Sbjct 240 CCAGCAACTAAACGCCCTATTAAGACTCGATTT-CTCTACGGCTCCCCTATACGGTTAAC 298 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 || || |||||| |||||||||||||||||||||||||||||||||||||||| ||||| Sbjct 299 CTC-GCTACTGAATATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCGAACAA 357 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 || ||||||||||||||||| |||| |||||||||||||||||||||||||||| | || Sbjct 358 -GTCGGCTCCCACTGCTTGTATGCATGCGGTTTCAGGATCTATTTCACTCCCCTCACAGG 416 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 ||||||||||||||||||||||||||||| ||||||||||||||||| | ||||||||| Sbjct 417 GGTTCTTTTCGCCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTTGGGAGTATTTAG 476 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 ||||||||||||||||||||||||||| ||| | || |||| |||||||||||| Sbjct 477 CCTTGGAGGATGGTCCCCCCATATTCAAACAGGATATCACGTGTCCCGTCCTACTCG 533 >seq16235 Length=863 Score = 349 bits (386), Expect = 9e-94 Identities = 338/418 (81%), Gaps = 20/418 (5%) Strand=Plus/Plus Query 9 CCACAGGTCAT-TCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGT 67 |||||| |||| |||| ||||||||||| | || ||||||||||||||| | || Sbjct 315 CCACAGCTCATCTCCG---ACTTTTTCAACAGGCGTGAGTTCGGTCCTCCAGTGCAT-GT 370 Query 68 TACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAG 127 ||| ||||| ||||||| |||| || |||||| | ||||| |||||||| || | Sbjct 371 TACTGCACCTT-CAACCTGGCCAT-GGCTAGATCATCAGGTTT-CGGGTCTACAACCG-G 426 Query 128 CGACTAGA-CGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCC-CTATTCGGTTAAGCT 185 | |||| | ||||||| | ||||||||||| |||||||||||| |||| ||||||| Sbjct 427 CAACTAAAGCGCCCTATTCAGACTCGCTTT-CGCTACGCCTCCAGCTATCGCCTTAAGCT 485 Query 186 T--TGCC-ACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 | |||| |||| |||||||||||||||||||||||||||||||| ||||||| ||| Sbjct 486 TGCTGCCGACTG----TAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCCCACA 541 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 | | || |||| |||| ||||| |||| |||||||||| |||||||||||||||| || Sbjct 542 AGGAGG-CTCCGACTGTTTGTAGGCATCCGGTTTCAGGTGCTATTTCACTCCCCTCGTCG 600 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 |||| |||||| |||||||||||||||||| ||||||||||||||| || |||| ||| Sbjct 601 GGGTGCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCACAGAGGAGTACTTA 660 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | |||||||| |||||||||||| |||||||| |||| |||| ||| |||||||| Sbjct 661 GGCTTGGAGGGTGGTCCCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTCG 718 >seq7661 Length=1873 Score = 340 bits (376), Expect = 4e-91 Identities = 331/413 (80%), Gaps = 16/413 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| ||||| ||| |||| || |||| || | ||||||| ||||||||| || ||| Sbjct 1222 CCACAAGTCATCCCG--AACTATTGCAACAGTTATGGGTTCGGCCCTCCAGTTGGT-GTT 1166 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||||||| || ||||| ||| || |||||| | |||||| |||||||| | | | | Sbjct 1165 ACCCAACCTT-CAGCCTGCTCAT-GGCTAGATCACTCGGTTT-CGGGTCTAATGC--AAC 1111 Query 129 GA-CTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186 || || |||||||| | ||||||||||| |||||||||| | |||| | |||||||| Sbjct 1110 GAACTGAACGCCCTATTCAGACTCGCTTT-CGCTACGCCTACACCTACCGGCTTAAGCTT 1052 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 || | | | ||||||| |||||||||||||||||||||||| ||||||| | Sbjct 1051 -GCTCGTTACACTAAGTCGTTGACCCATTATACAAAAGGTACGCCGTCACCCTT----GC 997 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGT 306 ||||||| |||| ||||| |||| |||||||||| ||||||||||||||||| |||||| Sbjct 996 GGGCTCCGACTGTTTGTAGGCATCCGGTTTCAGGTTCTATTTCACTCCCCTCGTCGGGGT 937 Query 307 TCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCT 366 |||||| |||||||||||||||||| |||| |||||||||| || |||| |||| || Sbjct 936 GCTTTTCACCTTTCCCTCACGGTACTTGTTCGCTATCGGTCATGCACGAGTACTTAGGCT 877 Query 367 TGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||| ||||| |||||| |||||||| |||| |||| ||| ||||||| Sbjct 876 TGGAGAGTGGTCTCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTC 824 >seq9863 Length=1459 Score = 324 bits (358), Expect = 3e-86 Identities = 317/395 (80%), Gaps = 13/395 (3%) Strand=Plus/Minus Query 29 TTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCC 88 ||||||||| | |||||||||||||||||| || ||||||| ||||| ||||||| Sbjct 696 TTTTTCAACATTGATCGGTTCGGTCCTCCAGTGGGT-GTTACCCCACCTT-CAACCTGGT 639 Query 89 CATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGA-CTAGA--CGCCCTAGTA 145 ||| | ||||||||| ||||| |||||||| | | | ||| ||||| ||||||| | Sbjct 638 CAT-GCCTAGATCGCCGGGTTT-CGGGTCTAATGC--ATCGAACTAGAGGCGCCCTATTC 583 Query 146 AGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTTTGCCACTGAAAATAAGTC 204 ||||||||||| |||| ||||| | ||||| | |||||||| | | | | |||||| Sbjct 582 AGACTCGCTTT-CGCTTCGCCTACACCTATCGGCTTAAGCTTGCTCGAT-ACACTAAGTC 525 Query 205 GCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTGCTTGTA 264 | |||||||||| ||| |||||||| ||||| | |||| | ||||||||||||||| Sbjct 524 ACAGACCCATTATGCAAGAGGTACGCGGTCACACCCTAAAGATG-CTCCCACTGCTTGTA 466 Query 265 CGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTC 324 ||| |||||||||| || ||||||||||||| |||||| |||||| |||||||||| Sbjct 465 GGCAACCGGTTTCAGGTACTGTTTCACTCCCCTCATCGGGGTGCTTTTCACCTTTCCCTC 406 Query 325 ACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCA 384 ||||||||||||| |||||||||| | ||||||||| |||||||| ||||||||| | Sbjct 405 ACGGTACTAGTTCGCTATCGGTCATGTACGAGTATTTAGGCTTGGAGGGTGGTCCCCCGA 346 Query 385 TATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 | |||||||| ||||| ||||| ||| ||||||| Sbjct 345 TGTTCAGACAGGGTTTCACGTGCCCCGCCCTACTC 311 >seq9360 Length=1536 Score = 322 bits (356), Expect = 1e-85 Identities = 329/418 (79%), Gaps = 10/418 (2%) Strand=Plus/Minus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || ||||||| ||||| || | ||||||||| | ||||||| ||||||||| | Sbjct 522 CCTATCCACAAGTCATCCCAGAA--TTTTTCAACATTCACGGGTTCGGACCTCCAGTTGG 465 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||||||||||| || ||||| ||| ||||||||| || ||||| |||||| | Sbjct 464 T-GTTACCCAACCTT-CATCCTGCTCAT-GGATAGATCACCTGGTTT-CGGGTCGTCATA 409 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAA 182 | ||| | ||||||| | ||||||||||| |||| ||||| | |||| | |||| Sbjct 408 CGTCGAACTTGGCGCCCTATTCAGACTCGCTTT-CGCTGCGCCTACACCTAACGGCTTAA 350 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 |||| || | | ||||||||||||||||||||||||||||||| ||||||| || Sbjct 349 GCTT-GCTCGACACATGAAGTCGCTGACCCATTATACAAAAGGTACGCCGTCACCCCGCA 291 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 | ||||||| |||||||||| || | || ||||||||||| ||||||||||||| | Sbjct 290 TGG-GGGCTCCGACTGCTTGTAGGCTTCCGATTTCAGGATCTGTTTCACTCCCCTCGTTG 232 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 |||| |||||| |||||||||||||||||| |||||||||||||| || |||| ||| Sbjct 231 GGGTGCTTTTCACCTTTCCCTCACGGTACTTGTTCACTATCGGTCGTAGAGGAGTACTTA 172 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTCG 420 | |||||||| |||||||||||| |||||||| |||| |||| ||| |||||||| Sbjct 171 GGCTTGGAGGGTGGTCCCCCCATGTTCAGACAGGATTTCACGTGTCCCGCCCTACTCG 114 >seq35524 Length=252 Score = 316 bits (350), Expect = 5e-84 Identities = 207/227 (91%), Gaps = 11/227 (5%) Strand=Plus/Minus Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTG----GGCTCCC 254 ||||||||||||||||||||||||||||||||||||||| ||| ||||||| Sbjct 234 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACC------AGTTTCCCGGCTCCC 181 Query 255 ACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 314 |||| ||||| |||| | |||||||| ||||||||||||||||||||||||||||||||| Sbjct 180 ACTGTTTGTATGCATGCAGTTTCAGGTTCTATTTCACTCCCCTCTCCGGGGTTCTTTTCG 121 Query 315 CCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGAT 374 |||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||| Sbjct 120 CCTTTCCCTCACGGTACTGGTTCACTATCGGTCAGTCAGGAGTATTTAGCCTTGGAGGAT 61 Query 375 GGTCCCCCCATATTCAGACAAA-GTTTCTCGTGCTCCGTCCTACTCG 420 ||||||||||| |||||||||| |||||||||||||||||||||||| Sbjct 60 GGTCCCCCCATGTTCAGACAAAGGTTTCTCGTGCTCCGTCCTACTCG 14 >seq28801 Length=389 Score = 279 bits (308), Expect = 1e-72 Identities = 306/391 (78%), Gaps = 16/391 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||||||||| ||| |||||| ||||| | ||||||||||||||| || || ||| Sbjct 389 CCACAGGTCAT-CCGAAGACTTTT-CAACGTCAACCGGTTCGGTCCTCCACTTTGT-GTT 333 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| || ||| |||||||||||| || |||||| | ||||| || ||||| | || | Sbjct 332 ACCAAAGCTT-CAACCTGCCCATGGG-TAGATCACAAGGTTT-CGCGTCTAAT-CCTACT 277 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC---CCT--ATTCGGTTAAG 183 |||| ||||||| | ||||||||||| |||| || |||| ||| | || |||| Sbjct 276 AACTATGCGCCCTATTCAGACTCGCTTT-CGCTCCGGCTCCGGACCTGAAGTCC-TTAAC 219 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 || || | | ||| ||| ||| | | |||||| ||||||| |||| ||||| || | Sbjct 218 CTC-GCTAGTAAAATTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACAGAATTA 160 Query 244 AGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGG 303 | | ||||| || ||||||| || |||||||||||| |||||||||| | || | || Sbjct 159 A-TCTGCTCCGACCGCTTGTAGGCGTACGGTTTCAGGTTCTATTTCACCCTTCTATTCGA 101 Query 304 GGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAG 363 || |||||| ||||||| |||| ||||| |||||||||||||| |||| ||||||||| Sbjct 100 AGTGCTTTTCACCTTTCCTTCACAGTACTTGTTCACTATCGGTCTTTCAGGAGTATTTAG 41 Query 364 CCTTGGAGGATGGTCCCCCCATATTCAGACA 394 ||||||||||||||||||||||||||||||| Sbjct 40 CCTTGGAGGATGGTCCCCCCATATTCAGACA 10 >seq13487 Length=1059 Score = 271 bits (300), Expect = 2e-70 Identities = 312/401 (78%), Gaps = 18/401 (4%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 |||||| |||| ||| ||||||| ||||| | |||||||||||||||||| || ||| Sbjct 130 CCACAGATCAT-CCGGAAACTTTT-CAACGTTTATCGGTTCGGTCCTCCAGTACGT-GTT 186 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| ||||||| |||| || |||||| | ||||| || ||||| || | | Sbjct 187 ACCGCACCTT-CAACCTGTCCATGGG-TAGATCACAAGGTTT-CGCGTCTACCTC--ATC 241 Query 129 -GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC---CCT-ATTCGGTTAAG 183 ||||| |||||||| | ||||||||||| |||| || ||| ||| | | |||| Sbjct 242 TGACTATACGCCCTATTCAGACTCGCTTT-CGCTTCGGATCCGTGCCTGAAGCACTTAAC 300 Query 184 CTTTGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 ||| |||| ||| | ||| ||| | | |||||| ||||||| |||| ||||| |||| Sbjct 301 CTT-GCCAGAGAAGAGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACGCAACT 359 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 || ||||| || ||||||| | | ||||||||||| |||||||||||||||| || | Sbjct 360 T-GTACGCTCCGACCGCTTGTAAGTACACGGTTTCAGGTTCTATTTCACTCCCCTTTC-G 417 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 ||||||||||| ||||||||||||||||| |||||||||||||| |||| |||||||| Sbjct 418 GGGTTCTTTTCATCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTTA 477 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTC 403 ||||| ||||||| || || |||| |||| | |||| Sbjct 478 GCCTTACCGGATGGTGCCGGCAGATTCCCACAAGGCGTCTC 518 >seq24473 Length=513 Score = 264 bits (292), Expect = 3e-68 Identities = 210/242 (87%), Gaps = 9/242 (4%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || ||||||| ||||| || || ||||||||| | || |||||||||||||||| || Sbjct 279 CCTATCCACACGTCATCCCC--AAATTTTTCAACATTTGTGGGTTCGGTCCTCCAGTAAG 336 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | |||||| ||||| |||||||| ||| |||||||||||| ||||| |||||||||| | Sbjct 337 T-GTTACCTCACCTT-CAACCTGCACAT-GGATAGATCGCCGGGTTT-CGGGTCTATTGC 392 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCTATTCGGTTAAG 183 | ||||||||||||||||| ||||||||||||| ||||||| ||||||||| ||||||| Sbjct 393 C-AGCGACTAGACGCCCTATTAAGACTCGCTTT-CGCTACGGCTCCCCTATACGGTTAAC 450 Query 184 CTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAA 243 ||| |||||||| |||||||||||||||||||||||||||||||||||||||| | || | Sbjct 451 CTT-GCCACTGACAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACACCACGA 509 Query 244 AG 245 || Sbjct 510 AG 511 >seq13665 Length=1045 Score = 250 bits (276), Expect = 6e-64 Identities = 303/399 (76%), Gaps = 13/399 (3%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 || |||||||| ||| ||||||| ||||| | |||||||||||||||| | || ||| Sbjct 536 CCTCAGGTCAT-CCGGAAACTTTT-CAACGTTTATCGGTTCGGTCCTCCATTACGT-GTT 480 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 ||| ||||| ||||||| |||| || |||||| | ||||| || ||||| ||| Sbjct 479 ACCGCACCTT-CAACCTGTCCATGGG-TAGATCACAAGGTTT-CGCGTCTACCTCCTCT- 424 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC---CCTATTCGGTTAAGCT 185 |||| |||||| | ||||||||||| |||| || || | ||| | | | | Sbjct 423 GACTGTGCGCCCTGTTCAGACTCGCTTT-CGCTTCGGCTGCGTGCCTGAAGGACTTAACC 365 Query 186 TTGCCACTGAAAA-TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAA 244 |||||| || | ||| ||| | | |||||| ||||||| |||| ||||| ||| Sbjct 364 TTGCCAGATAAGAGTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACGGAACTT- 306 Query 245 GTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGG 304 || ||||| || ||||||| | | ||||||||||| |||||||||||||||| | |||| Sbjct 305 GTCCGCTCCGACCGCTTGTAAGTACACGGTTTCAGGTTCTATTTCACTCCCCTGTTCGGG 246 Query 305 GTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGC 364 ||||||||| |||||||||||||||||| |||||||||||||| |||| |||||||||| Sbjct 245 GTTCTTTTCACCTTTCCCTCACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTTAGC 186 Query 365 CTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTC 403 ||| ||||||| || || |||| |||| | |||| Sbjct 185 CTTACCGGATGGTGCCGGCAAATTCCCACAAGGCGTCTC 147 >seq6100 Length=2287 Score = 221 bits (244), Expect = 3e-55 Identities = 307/417 (74%), Gaps = 11/417 (3%) Strand=Plus/Plus Query 4 CCGATCCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAG 63 || ||||||| |||| | | || ||||||||| | ||||||||||||| | Sbjct 1161 CCTATCCACAACTCAT--CTCAAAACTTTTCAACGTTCACGAGTTCGGTCCTCCACGCAA 1218 Query 64 TAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTC 123 | ||||| ||| ||||||| |||| ||||||||| | | ||||||||||| | Sbjct 1219 TT-TTACCTGCGCTT-CAACCTGGCCAT-GGATAGATCACTGCGGTTTCGGGTCTACAAC 1275 Query 124 CCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCC-TATTCGGTTAA 182 | |||| ||||||| ||||||||||||| ||||||| |||| | | ||| | | | Sbjct 1276 A-ACTAACTATTCGCCCTATTAAGACTCGCTTT-CGCTACGGCTCCACATCTTCTGCTTA 1333 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 | | || | | | ||| |||| | |||| | ||| ||| |||| || ||| Sbjct 1334 ACCTCGCTAGTTACTGTAACTCGCCGGTTCATTCTTCAATAGGCACGCTGTTGACCACAT 1393 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 ||| || || | |||||||||| |||||||||||||| ||| ||||||||||||| ||| Sbjct 1394 AAG-GGTCTTCAACTGCTTGTAGACATACGGTTTCAGGTTCTTTTTCACTCCCCTC-CCG 1451 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 |||| |||||| ||||||||||||||||||| | | ||||||||| || ||||||| Sbjct 1452 GGGTGCTTTTCACCTTTCCCTCACGGTACTA-TACGCTATCGGTCGCCAAGGAGTATTTT 1510 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 |||||||||| |||||||||| ||| |||| ||||| |||| ||| ||||| Sbjct 1511 GCCTTGGAGGGTGGTCCCCCCTGCTTCCCACAAGGTTTCACGTGTCTCGTGGTACTC 1567 >seq12131 Length=1185 Score = 205 bits (226), Expect = 2e-50 Identities = 305/417 (73%), Gaps = 18/417 (4%) Strand=Plus/Minus Query 9 CCACAGGTCATTCCGCTAACT-TTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGT 67 ||||||||||| ||| || | ||||||||| | |||||||| |||||| | || || Sbjct 413 CCACAGGTCAT-CCG--AAGTCTTTTCAACGACAACCGGTTCGGACCTCCACTGTGT-GT 358 Query 68 TACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAG 127 |||| | ||| || ||||||||| || |||||| | |||||| || ||||| | | | Sbjct 357 TACCACAGCTT-CATCCTGCCCATGGG-TAGATCACACGGTTT-CGCGTCTAA--CACTG 303 Query 128 C-GACTA-GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCC---CTATTCGGTTAA 182 | ||||| | ||||||| | ||||||||||| ||||||| ||| || | | | Sbjct 302 CCGACTATGGCGCCCTATTCAGACTCGCTTT-CGCTACGGATCCGTGGCTGAACCACTTA 244 Query 183 GCTTTGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACA 242 | ||||| | ||| ||| | | |||||| ||||||| |||| ||||||| || Sbjct 243 TCCTTGCCGGCAACGTTAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACCCCACG 184 Query 243 AAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCG 302 |||||| || ||||||| || |||||||||||| ||||||||||||| | | Sbjct 183 CCA--GGCTCCGACCGCTTGTAGGCGTACGGTTTCAGGTACTATTTCACTCCCTTGTTTA 126 Query 303 GGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTA 362 |||| |||||| ||||||||| |||||||| |||||||||||||| | || |||||||| Sbjct 125 GGGTGCTTTTCACCTTTCCCTTACGGTACTGGTTCACTATCGGTCTCTAAGGAGTATTTA 66 Query 363 GCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 ||||| |||||| | || ||||| ||| || ||| | ||| |||||| Sbjct 65 GCCTTACCAGATGGTGCTGGCAGATTCACGCAAGATTCCTCCGGTCCCGCGCTACTC 9 >seq25055 Length=493 Score = 192 bits (212), Expect = 1e-46 Identities = 228/292 (78%), Gaps = 14/292 (5%) Strand=Plus/Minus Query 10 CACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTTA 69 |||| |||| ||| |||||||| ||||| || ||||||||| |||||||| || |||| Sbjct 285 CACAACTCAT-CCGGTAACTTTT-CAACGTTAATCGGTTCGGACCTCCAGTGCGT-GTTA 229 Query 70 CCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCC-CAGC 128 || ||||| || |||| ||| | |||||||||| ||||| |||||||| | | || Sbjct 228 CCGCACCTT-CATCCTGGTCAT-GCATAGATCGCCGGGTTT-CGGGTCTAATACTTCAA- 173 Query 129 GACTA-GACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCC-CCTATTCGGTTAAGCTT 186 |||| | ||||||| | ||||||||||| |||| ||||| | |||| | |||||||| Sbjct 172 -ACTAAGTCGCCCTATTCAGACTCGCTTT-CGCTGCGCCTACACCTAACGGCTTAAGCTT 115 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 || | | |||||| | |||||||||| ||| |||||||||||||||| | |||| Sbjct 114 -GCTTGATACATTAAGTCACAGACCCATTATGCAAGAGGTACGCAGTCACCCCATAAAG- 57 Query 247 GGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTC 298 |||||| |||||||||| ||| | |||||||| || ||||||||||||| Sbjct 56 AGGCTCCTACTGCTTGTAGGCAATCCGTTTCAGGTACTGTTTCACTCCCCTC 5 >seq14778 Length=957 Score = 183 bits (202), Expect = 8e-44 Identities = 226/299 (76%), Gaps = 10/299 (3%) Strand=Plus/Minus Query 83 CCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTA 142 |||||||| ||| |||||| | ||||| || ||||| || | |||| |||||| Sbjct 957 CCTGCCCA-AGGGTAGATCACAAGGTTT-CGCGTCTACCTCACCT-GACTGTGCGCCCTG 901 Query 143 GTAAGACTCGCTTTTCGCTACGCCTCC---CCTATTCGGTTAAGCTTTGCCACTGAAAA- 198 | ||||||||||| |||| || || | ||| | | | | |||||| || | Sbjct 900 TTCAGACTCGCTTT-CGCTTCGGCTGCGTCCCTGAAGGACTTAACCTTGCCAGATAAGAG 842 Query 199 TAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGTGGGCTCCCACTG 258 ||| ||| | | |||||| ||||||| |||| ||||| ||| | | ||||| || | Sbjct 841 TAACTCGTAGGCTCATTATGCAAAAGGCACGCCGTCACGGAACTGA-TCCGCTCCGACCG 783 Query 259 CTTGTACGCATACGGTTTCAGGATCTATTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTT 318 |||||| ||| ||||||||||| ||| |||||||||||| | ||||||||||||| ||| Sbjct 782 CTTGTAAGCACACGGTTTCAGGTTCT-TTTCACTCCCCTGTTCGGGGTTCTTTTCATCTT 724 Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGT 377 |||||||||||||| || ||||||||||| |||| |||||||||||||| |||||| Sbjct 723 TCCCTCACGGTACTGGTCCACTATCGGTCTCTCAGGAGTATTTAGCCTTGCCAGATGGT 665 >seq31894 Length=310 Score = 123 bits (136), Expect = 6e-26 Identities = 88/101 (87%), Gaps = 0/101 (0%) Strand=Plus/Plus Query 319 TCCCTCACGGTACTAGTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTC 378 |||||||||||||| |||||||||||||| |||| ||||||||||||| | |||||||| Sbjct 1 TCCCTCACGGTACTGGTTCACTATCGGTCTCTCAGGAGTATTTAGCCTTAGCGGATGGTC 60 Query 379 CCCCCATATTCAGACAAAGTTTCTCGTGCTCCGTCCTACTC 419 || ||| ||||||||| ||||| ||||| ||| ||||||| Sbjct 61 CCGCCAAATTCAGACAGGGTTTCACGTGCCCCGCCCTACTC 101 >seq12158 Length=1183 Score = 122 bits (134), Expect = 2e-25 Identities = 211/292 (72%), Gaps = 15/292 (5%) Strand=Plus/Plus Query 9 CCACAGGTCATTCCGCTAACTTTTTCAACGGTAGTCGGTTCGGTCCTCCAGTTAGTAGTT 68 ||||| |||| ||||| | ||||||||| ||||||||||| |||||| ||||| | Sbjct 866 CCACAACTCAT-CCGCTGA-TTTTTCAACATCAGTCGGTTCGGACCTCCACTTAGT-TTC 922 Query 69 ACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCCGGTTTTCGGGTCTATTTCCCAGC 128 |||||| | |||| |||| ||| ||||||||| ||| | |||||||| | | ||| Sbjct 923 ACCCAAGC-TTCATCCTGGTCAT-GGATAGATCACCCAG-GTTCGGGTCCA-TAAGCAGT 978 Query 129 GACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGCCTCCCCT--ATTCGGTTAAGCTT 186 ||| | |||| | ||||||||| | |||||||| |||| | ||| |||| | Sbjct 979 GAC-AATTGCCCCATGAAGACTCGC-TCTCGCTACGGCTCCGGTGGGTTCCCTTAA-CCA 1035 Query 187 TGCCACTGAAAATAAGTCGCTGACCCATTATACAAAAGGTACGCAGTCACCCAACAAAGT 246 ||||||| ||||||||| | | |||| | ||| ||| |||| |||| | || | Sbjct 1036 AGCCACTGCCTATAAGTCGCCGGCTCATTCTTCAACAGGCACGCGGTCAGAGATCACTTT 1095 Query 247 GGGCTCCCACTGCTTGTACGC---ATACGGTTTCAGGATCTATTTCACTCCC 295 ||||||||||||| || ||||||||| | |||||||||||||| Sbjct 1096 CTCCTCCCACTGCTTGGGAGCTCAGCACGGTTTCACGTTCTATTTCACTCCC 1147 >seq24409 Length=515 Score = 95.1 bits (104), Expect = 3e-17 Identities = 73/87 (84%), Gaps = 0/87 (0%) Strand=Plus/Plus Query 334 GTTCACTATCGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGAC 393 |||| |||||||||| | ||||||||| |||||||| |||||||||||| ||||||| Sbjct 1 GTTCGCTATCGGTCATGTACGAGTATTTAGGCTTGGAGGGTGGTCCCCCCATGTTCAGAC 60 Query 394 AAAGTTTCTCGTGCTCCGTCCTACTCG 420 | ||||| ||||| ||| |||||||| Sbjct 61 AGGGTTTCACGTGCCCCGCCCTACTCG 87 >seq28510 Length=397 Score = 93.3 bits (102), Expect = 1e-16 Identities = 62/69 (90%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 352 AGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCAGACAAAGTTTCTCGTGCTCCG 411 || ||||||||||||||||||||||||||||||| |||||||| ||||||||||| ||| Sbjct 397 AGGAGTATTTAGCCTTGGAGGATGGTCCCCCCATGTTCAGACAGGGTTTCTCGTGCCCCG 338 Query 412 TCCTACTCG 420 | |||||| Sbjct 337 CCTTACTCG 329 >seq7652 Length=1875 Score = 75.2 bits (82), Expect = 3e-11 Identities = 87/111 (78%), Gaps = 6/111 (5%) Strand=Plus/Minus Query 286 TTTCACTCCCCTCTCCGGGGTTCTTTTCGCCTTTCCCTCACGGTACTAGTTCACTATCGG 345 |||||| || || || | || |||||| | ||||||||||||||| ||| |||| ||| Sbjct 936 TTTCAC-CCTCTTACCAGAGTACTTTTCAACGTTCCCTCACGGTACTTGTTTACTAACGG 878 Query 346 TC-AGT-CAGTAGTATTTAGCCTTGGAGGATGGT--CCCCCCATATTCAGA 392 || || || || ||||||||||| ||||| | | |||||||||||||| Sbjct 877 TCTTGTGCATTA-TATTTAGCCTTAGAGGAAGTTTATCCCCCATATTCAGA 828 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241158747776