Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01001503.1 Length=170 Score E Sequences producing significant alignments: (Bits) Value seq15378 111 1e-22 >seq15378 Length=918 Score = 111 bits (122), Expect = 1e-22 Identities = 111/144 (77%), Gaps = 0/144 (0%) Strand=Plus/Plus Query 19 CGCCATGGGCGCCGGTATCAAGCCGATCTGCGGCGCCGACCTGTGGCTGTCCAACAAAGA 78 ||||||||||||||| |||||||| ||||||||||||||| | |||||| | | | | Sbjct 1 CGCCATGGGCGCCGGCATCAAGCCTATCTGCGGCGCCGACATCTGGCTGGCAAGCGCCTA 60 Query 79 CCCGGACAACGCCCTGAGCCGCATCGGCCTGCTGGCGATGAACGGTGTTGGTTACCGCAA 138 | || | | |||| |||||| |||||||||||||||| || || ||||| Sbjct 61 CGAAGATGGCCCGCTGACCCGCATGACCCTGCTGGCGATGAACCCCAAGGGCTATCGCAA 120 Query 139 CCTCACCGAGCTGATTTCCCGTGG 162 ||||||||| ||||||||||| || Sbjct 121 CCTCACCGAACTGATTTCCCGCGG 144 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 444646862449