Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01001569.1 Length=509 Score E Sequences producing significant alignments: (Bits) Value seq19441 194 5e-47 >seq19441 Length=700 Score = 194 bits (214), Expect = 5e-47 Identities = 199/255 (78%), Gaps = 9/255 (4%) Strand=Plus/Minus Query 2 GACGGTCGTCCGTCGCCGACCCTGGGCTCGCGTGGCGGCCTGTACCCGGAGACC-GCACT 60 || || || || |||| | ||||||| | || || ||| ||||||| |||||| |||| Sbjct 259 GATGGCCGGCCTTCGCAGTCCCTGGGTACCCGCGGTGGCATGTACCCCGAGACCAGCACC 200 Query 61 GATTTCGGTGACCGGCCAGGATGTGCTGCCCAAGTTGCAGGCCCAGGCTGAAGCTGCTGT 120 || || | ||| | || ||| |||||||| ||||||| ||||||||||||||||| Sbjct 199 -ATCAGCGTCAGCGGTAATGACGTGGTGCCCAAGCTGCAGGCTCAGGCTGAAGCTGCTGT 141 Query 121 GCGTTTGTTGGGCTTTACGCCGACC---AACTC--GCCAGGCGTACCACAACTGACCGTG 175 ||| || | ||||| || |||||| ||| | || | || ||| || ||||||||| Sbjct 140 GCGCCTGCTCGGCTTCACCCCGACCCCGAACGCCGGCAATGC--ACCGCAGCTGACCGTG 83 Query 176 ACCCTGGCCGAGCTTAAATACCAGTCGCCCAAAGACGGCCTGTATGTGACCGAGGCTTCC 235 |||||||||||||| || ||||||||||| |||||| ||| || ||||||||||| || Sbjct 82 ACCCTGGCCGAGCTGAAGTACCAGTCGCCGAAAGACAACCTTTACGTGACCGAGGCCACC 23 Query 236 ATCGGCGCCACCTTC 250 ||||||||||||||| Sbjct 22 ATCGGCGCCACCTTC 8 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1525857532704