Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01001671.1 Length=306 Score E Sequences producing significant alignments: (Bits) Value seq28299 84.2 4e-14 >seq28299 Length=403 Score = 84.2 bits (92), Expect = 4e-14 Identities = 60/69 (87%), Gaps = 0/69 (0%) Strand=Plus/Minus Query 53 GAGCTCTATGGCTCGTTGGGCGCCACTGGCAAAGGCCACGGCAGCGACAAGGCCATGTTG 112 ||||| ||||||||| |||||||||| ||||| ||||| |||||||||||||| | ||| Sbjct 376 GAGCTGTATGGCTCGCTGGGCGCCACCGGCAAGGGCCATGGCAGCGACAAGGCAGTCTTG 317 Query 113 CTGGGCCTG 121 ||||| ||| Sbjct 316 CTGGGGCTG 308 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 876488394048