Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01001674.1 Length=313 Score E Sequences producing significant alignments: (Bits) Value seq8458 89.7 9e-16 >seq8458 Length=1698 Score = 89.7 bits (98), Expect = 9e-16 Identities = 117/159 (74%), Gaps = 5/159 (3%) Strand=Plus/Minus Query 109 CAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAA 168 ||| ||||| ||||| | ||||||||||| ||||| ||||| || ||| | |||||| | Sbjct 286 CAACCCGCCCAAGGTCGAGGGCAAGGACGACGTGACGGGCGAGGAGCTGATTCAGCGCGA 227 Query 169 GGACGACACCGAAGAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCC 228 ||||||| ||||| ||||| | |||||| || ||| |||| ||| || Sbjct 226 AGACGACAAGGAAGACACCGTCAAGAAGCGCCTGGACGTCTACAGCGCGCAGACCCGCCC 167 Query 229 GCTGGTGGACTTCTAC-CAGAAGCTGGCTGCTGCCCAGG 266 ||||||||||| |||| | | ||||| || ||||||| Sbjct 166 GCTGGTGGACTACTACTCTG--GCTGG--GCAGCCCAGG 132 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 898880433312