Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012-
03-13] 35,539 sequences; 64,332,776 total letters
Query= AAMG01001674.1
Length=313
Score E
Sequences producing significant alignments: (Bits) Value
seq8458 89.7 9e-16
>seq8458
Length=1698
Score = 89.7 bits (98), Expect = 9e-16
Identities = 117/159 (74%), Gaps = 5/159 (3%)
Strand=Plus/Minus
Query 109 CAATCCGCCAAAGGTTGCAGGCAAGGACGATGTGACCGGCGAAGACCTGGTACAGCGCAA 168
||| ||||| ||||| | ||||||||||| ||||| ||||| || ||| | |||||| |
Sbjct 286 CAACCCGCCCAAGGTCGAGGGCAAGGACGACGTGACGGGCGAGGAGCTGATTCAGCGCGA 227
Query 169 GGACGACACCGAAGAAACCGTTCGTCACCGCCTGTCTGTTTACCATTCGCAAACCAAGCC 228
||||||| ||||| ||||| | |||||| || ||| |||| ||| ||
Sbjct 226 AGACGACAAGGAAGACACCGTCAAGAAGCGCCTGGACGTCTACAGCGCGCAGACCCGCCC 167
Query 229 GCTGGTGGACTTCTAC-CAGAAGCTGGCTGCTGCCCAGG 266
||||||||||| |||| | | ||||| || |||||||
Sbjct 166 GCTGGTGGACTACTACTCTG--GCTGG--GCAGCCCAGG 132
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 898880433312
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |