Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01001752.1 Length=400 Score E Sequences producing significant alignments: (Bits) Value seq9360 242 9e-62 seq12158 208 2e-51 seq7661 208 2e-51 seq9863 205 2e-50 seq6100 201 3e-49 seq10295 152 1e-34 seq16235 131 4e-28 seq6297 123 6e-26 seq1161 114 3e-23 seq13665 107 5e-21 seq22240 102 2e-19 seq12131 102 2e-19 seq23150 78.8 2e-12 seq24174 73.4 9e-11 >seq9360 Length=1536 Score = 242 bits (268), Expect = 9e-62 Identities = 300/404 (74%), Gaps = 11/404 (3%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| | || ||||||||||||| |||||| |||| | ||||| | ||| || Sbjct 1119 CGACTACGCTTTTCAGCCTCGCCTTAGGGGCCGACTAACCCTGCGCAGATTAGCTTTACG 1060 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCC-GTCACACGCTACTCATGCCT 119 | ||||||||||| |||||| | | ||| ||| | || || |||||||| | Sbjct 1059 CAGGAACCCTTGGTCTTTCGGCGACAGTGTTTCTCACACTGTTTATCGTTACTCATGTCA 1000 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACG 178 ||||||||||| | | ||||| | || |||| | ||||||| || || Sbjct 999 GCATTCTCACTTCCGATACCTCCAGCCAACC-TCACGGTTGACCTTCACCGGCTTACGGA 941 Query 179 ACGCTCCCCTACC-CAACCACACAGGTTGC-----CACAGCTTCGGCGGATAACTTAAGC 232 ||||||| ||||| | |||| || ||| || | |||||||| | ||| ||| Sbjct 940 ACGCTCCGCTACCGCTTGCACAAAG--TGCAAACCCATACCTTCGGCGACTGGCTTGAGC 883 Query 233 CCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGG 292 |||| |||||| || |||| | ||| ||||| ||||||||| |||||| ||||| |||| Sbjct 882 CCCGTTACATTTTCCGCGCAGGATCGCTTGATCAGTGAGCTGTTACGCTTTCTTTAAAGG 823 Query 293 ATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGA 352 ||||||||||| |||||||||||||| ||||| | |||| ||||||| ||||||||| | Sbjct 822 ATGGCTGCTTCTAAGCCAACCTCCTGATTGTCAAAGCAATCCCACATCGTTTCCCACTTA 763 Query 353 GTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 | || |||| |||||||||| ||||| | ||| ||||||||| Sbjct 762 GCCAGTACTTGGGGGCCTTAGATGATGGTTAGGGTTGTTTCCCT 719 >seq12158 Length=1183 Score = 208 bits (230), Expect = 2e-51 Identities = 298/409 (73%), Gaps = 18/409 (4%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| ||||||| |||||| || ||||||||| | ||| ||| | | Sbjct 249 CGACTACGCCTTTCGGCCTGATCTTAGGCCCTGACTCACCCTCCGTGGACGAACCTTGCG 308 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 ||||||||| | | |||| | | |||||| |||| | || |||||| ||| Sbjct 309 GAGGAACCCTTAGGTTTTCGGGGCATTGGATTCTCACCAATGTTTGCGTTACTCAAGCCG 368 Query 120 GCATTCTCACT--CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACAC 177 ||||||| || ||| || ||||| || || | | | ||||| || || | | Sbjct 369 ACATTCTCGCTTCCGCTTCG--TCCACAACTGC-TCGCGCAGGTGCTTC-CCTCTAAGGC 424 Query 178 G--ACGCTCCCCTACCCAACCAC----ACAGGTTGCCACAGCTTCGGCGGATAACTTAAG 231 | ||||||||||||| | || ||| | ||||||||||||| ||| |||| | Sbjct 425 GGAACGCTCCCCTACCGATGCATTTTTACA---TCCCACAGCTTCGGCAGATCGCTTA-G 480 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| | ||| ||||||| | | || || ||||||||||||||||||||||||||| Sbjct 481 CCCCGTT-CATCTTCGGCGCAAGAGCGCTCGATCAGTGAGCTATTACGCACTCTTTCAAG 539 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 | |||||||||| | || |||||||||| ||||| ||| | | || ||||| ||||| Sbjct 540 GGTGGCTGCTTCTAGGCAAACCTCCTGGCTGTCTCTGCACCCCTACCTCCTTCATCACTG 599 Query 352 AGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 || || |||||||||||||||| ||||| |||||||| |||||||| Sbjct 600 AGCGGTCATTTAGGGGCCTTAGCTGGTGATCCGGGCTGTTCCCCTCTCG 648 >seq7661 Length=1873 Score = 208 bits (230), Expect = 2e-51 Identities = 295/409 (72%), Gaps = 12/409 (3%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||| |||| |||||| |||||| ||| || |||| | |||| ||||| | Sbjct 1830 CGACTACGCGTGTCCGCCTCGTCTTAGGGGCCGGCTAACCCTGCTCAGATTAACTTTAAG 1771 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCAC-CCGTCACACGCTACTCATGCCT 119 | ||||||||||| |||||| | | || ||| || | || |||||||| | Sbjct 1770 CAGGAACCCTTGGTCTTTCGGCGAGGGAGTCTCTCACTCCCTTTATCGTTACTCATGTCA 1711 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGC-TTCACC-ACTGACAC 177 ||||| |||| | | ||||| || | |||| | | || ||||| ||| || Sbjct 1710 ACATTCGCACTTCCGATATCTCCAGCAGCCC-TCACGGGTCCGCCTTCACAGACTTACGG 1652 Query 178 GACGCTCCCCTACCCAACCACACAGGTTG---CCACAGCTTCGGCGGATAACTTAAGCCC 234 ||||||| ||||| || || | |||| || ||||||||| | || ||| ||||| Sbjct 1651 AACGCTCCGCTACCACACAACTTACGTTGTATCCTCAGCTTCGGTGCATGGCTTTAGCCC 1592 Query 235 CGCTACATTATCGGCGCGGAATCACTT-----GACCAGTGAGCTATTACGCACTCTTTCA 289 || |||||| ||||||| | | ||| |||||||||||| |||||| ||||| | Sbjct 1591 CGTTACATTTTCGGCGCAAAGACCCTTATTTAGACCAGTGAGCTGTTACGCTTTCTTTAA 1532 Query 290 AGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCAC 349 | |||||||||||| |||||||| |||||||||| | | | | ||||||||||||||| Sbjct 1531 ATGATGGCTGCTTCTAAGCCAACATCCTGGTTGTTTTGGGATCCTCACATCCTTTCCCAC 1472 Query 350 TGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | || || |||| ||| ||||||||| | || ||| |||| |||||| Sbjct 1471 TTAGCCATGACTTGGGGACCTTAGCTGGAGGTCAGGGTTGTTGCCCTCT 1423 >seq9863 Length=1459 Score = 205 bits (226), Expect = 2e-50 Identities = 294/411 (72%), Gaps = 20/411 (5%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||| || |||| |||| |||||| ||| ||||||| | | || | ||| | Sbjct 1321 CGACTACCCCCTTCGGGCTCGTCTTAGGGGCCGGCTCACCCTGCTCGGATTAGCTTTGCG 1262 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 | ||||||||||| |||||| ||| || ||||| | ||||||||||| || Sbjct 1261 CAGGAACCCTTGGTCTTTCGGCGAGAGGGCATCTCACCCTCTTTATCGCTACTCATGTCT 1202 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTG-ACACG 178 |||||| |||| | | |||||| | || |||| | ||||||| | || Sbjct 1201 GCATTCGCACTTCCGATACCTCCACGGT-CGGTTACCCTTCCGCTTCACAGGCGTACGGA 1143 Query 179 ACGCTCCCCTACCC--------AACCACACAGGTTGCCACAGCTTCGGCGGATAACTTAA 230 ||||||| ||||| || ||||| ||| |||||||| | | ||| | Sbjct 1142 ACGCTCCGCTACCGCGTGTTCAAAGAACACAC----CCAAAGCTTCGGTGCACGTCTTGA 1087 Query 231 GCCCCGCTACATTATCGGCGCGGAATCACTTG-----ACCAGTGAGCTATTACGCACTCT 285 |||||| |||||| ||| ||| | ||| |||| ||||||||||| |||||| ||| Sbjct 1086 GCCCCGTTACATTTTCGCCGCAGGATCTCTTGTTTAGACCAGTGAGCTGTTACGCTTTCT 1027 Query 286 TTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTC 345 || ||||||||||||||| ||||||||||||||||||| | | || |||||| ||||| Sbjct 1026 TTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTTTTGGAAATCCCACATGCTTTC 967 Query 346 CCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCT 396 ||||| ||| |||| ||| ||||||||| || || ||||||||||||| Sbjct 966 CCACTTAGTGGTGACTTGGGGACCTTAGCTGTTGGTCAGGGCTGTTTCCCT 916 >seq6100 Length=2287 Score = 201 bits (222), Expect = 3e-49 Identities = 294/406 (72%), Gaps = 11/406 (3%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 || |||||| | | |||||| |||||| ||||||| |||| | | ||| | | | | Sbjct 565 CGCCTACGCATTTACGCCTCGGCTTAGGTCCCGACTTACCCTGAGACGACGAGCGTTGCT 624 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCT 119 | |||| |||| | |||| |||| ||||| ||| ||| |||||||||| || Sbjct 625 CAGGAAACCTTAGGCTTTCGGTGGACAAGATTCTCACTTGTCTTTTCGCTACTCATACCG 684 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGA 179 ||||||||||| || ||||||| | | | || | ||||| | | | | Sbjct 685 GCATTCTCACTTCTATATACTCCACAGCTCCTT-ACGGTACTGCTTCGATGCGTATAGAA 743 Query 180 CGCTCCCCTACC-CAACCAC-ACAGGTTG----CCACAGCTTCGGCGGATAACTTAAGCC 233 |||||||||||| | || | |||| ||| |||||||| |||| |||| Sbjct 744 CGCTCCCCTACCACTTGTACCAAAGGTACAAATCCATAGCTTCGGTTCCGTACTTTAGCC 803 Query 234 CCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293 ||| |||| ||||||| || | || |||||||||||||||||||||||||| || | Sbjct 804 CCGG-ACATCTTCGGCGCAAAACCTCTCGACCAGTGAGCTATTACGCACTCTTTAAATGG 862 Query 294 TGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTGAG 353 |||||||||| |||||||| |||||||||| | | | |||||||||||| ||||| || Sbjct 863 TGGCTGCTTCTAAGCCAACATCCTGGTTGTTTCTGAAGTTCCACATCCTTTGCCACTTAG 922 Query 354 T-CACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 | | || || ||| |||||||||||| |||||||||||||||||| Sbjct 923 TACGGCA-TTTGGGACCTTAGCTGATGGTCTGGGCTGTTTCCCTCT 967 >seq10295 Length=1395 Score = 152 bits (168), Expect = 1e-34 Identities = 287/408 (70%), Gaps = 18/408 (4%) Strand=Plus/Minus Query 4 CTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACCCTG 63 |||||| | || ||||||||||||| ||||||||||| || || ||| | | | Sbjct 615 CTACGCATCTCTGCCTCGCCTTAGGGGCCGACTCACCCTACGCCGATGAACGTTGCGTAG 556 Query 64 GAACCCTTG-GATAATCGGCGGACGGGATTCCCACCCG-TCACACGCTACTCATGCCTGC 121 ||| ||||| | | | ||||| ||| || ||||| | |||||||||||| | || Sbjct 555 GAAACCTTGCGCTTA-CGGCGAGGGGGCTTTTCACCCCCTTTAACGCTACTCATGTCAGC 497 Query 122 ATTCTCACT-CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCA-CTGACACGA 179 |||| |||| | || | ||||| || | |||| || |||| | | ||| | Sbjct 496 ATTCGCACTTCTGAT-ACCTCCAGCATTCC-TCACAGTACACCTTCGCAGGCCTACAGAA 439 Query 180 CGCTCCCCTACCCA--ACCACACAGGTTG------CCACAGCTTCGGCGGATAACTTAAG 231 ||||| |||||| ||| | | || || |||||||| |||| | Sbjct 438 CGCTCTCCTACCATGCACCTAATAAATTAGGGCATCCGAAGCTTCGGTTACGTGCTTA-G 380 Query 232 CCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAG 291 ||||| ||||| || |||| | | ||| ||||||||||||||||||| ||||| || Sbjct 379 CCCCGTTACATCTTCCGCGCAGGACGACTCGACCAGTGAGCTATTACGCTTTCTTTAAAT 320 Query 292 GATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTTTCCCACTG 351 |||||||||||| |||||||| |||||| |||||| || |||| || ||| ||||| Sbjct 319 GATGGCTGCTTCTAAGCCAACATCCTGGCTGTCTATGCCTTCCCACTTCGTTTTCCACTT 260 Query 352 AGTCACCAC-TTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 || ||| | || ||| ||||||||| | |||||| ||||||||||| Sbjct 259 AG-CACGTCATTTGGGACCTTAGCTGTCGGTCTGGGTTGTTTCCCTCT 213 >seq16235 Length=863 Score = 131 bits (144), Expect = 4e-28 Identities = 98/115 (85%), Gaps = 0/115 (0%) Strand=Plus/Plus Query 284 CTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAACTCCACATCCTT 343 |||| ||||||||||||||| |||||||||||||||||||| || |||||||||| Sbjct 1 CTTTAAAGGATGGCTGCTTCTAAGCCAACCTCCTGGTTGTCATGGCCTTCCCACATCCTT 60 Query 344 TCCCACTGAGTCACCACTTAGGGGCCTTAGCTGATGATCTGGGCTGTTTCCCTCT 398 ||||||| || |||||||| ||| ||||||||| | |||||||| ||||||||| Sbjct 61 TCCCACTTAGCCACCACTTGGGGACCTTAGCTGGCGGTCTGGGCTCTTTCCCTCT 115 >seq6297 Length=2229 Score = 123 bits (136), Expect = 6e-26 Identities = 272/395 (69%), Gaps = 12/395 (3%) Strand=Plus/Minus Query 13 TCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAAC-TTGACCCTGGAACCCTT 71 |||| || ||||||| ||||||| |||| | | || | | |||| | |||| |||| Sbjct 637 TCGGGTTCTCCTTAGGTCCCGACTAACCCTGATCCGATTAGCGTTGATCA-GGAAACCTT 579 Query 72 GGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCCTGCATTCTCACT 130 |||| || |||| ||| | |||| | | || |||| |||||| |||| | | Sbjct 578 ATCCTTTCGGTGGGCGGGTTTCTCGCCCGCCTTATCGTTACTTATGCCTACATTTGCTTT 519 Query 131 CGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACGACGCTCCCCTAC 190 || |||||| ||| || | ||| | | |||||| | | | |||||||||| Sbjct 518 TCTATACACTCCAGCACCCATT-ACCAGATACCTTCACTGTATATAGAATGCTCCCCTAC 460 Query 191 CCAACCACA-CAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGC 249 | | | || | ||| |||||||| | | || || | |||| | |||||| Sbjct 459 CGATATATTTCAA--TCCCATAGCTTCGGTGTACAATTTTATGCCCGTTT-ATTATCCAT 403 Query 250 GCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGC 308 || ||| || ||| |||||||| ||||||||||||| || || ||||||||||||||| Sbjct 402 GCCCGATCGCTCGACTAGTGAGCTGTTACGCACTCTTTAAATGAATGGCTGCTTCCAAGC 343 Query 309 CAACCTCCTGGTTGTCTACGCAACTCCACATCCTT--TCCCACTGAG-TCACCACTTAGG 365 |||| |||| | ||||| |||| || || || | | ||| || | | || || Sbjct 342 CAACATCCTAGCTGTCTGTGCAATCGGACCTCGTTAGTTCAACTTAGCTGTATATTTGGG 283 Query 366 GGCCTTAGCTGATGATCTGGGCTGTTTCCCTCTCG 400 | |||||||||||| |||||| | ||||||||||| Sbjct 282 GACCTTAGCTGATGGTCTGGGTTCTTTCCCTCTCG 248 >seq1161 Length=8540 Score = 114 bits (126), Expect = 3e-23 Identities = 141/189 (75%), Gaps = 3/189 (2%) Strand=Plus/Minus Query 212 GCTTCGGCGGATAACTTAAGCCCCGCTACATTATCGGCGCGGAATCACTTGACCAGTGAG 271 ||||||| || |||||| | || |||||| | ||||| || ||| ||||| |||| Sbjct 6355 GCTTCGGTAAATTTCTTAAGTCTCGATACATTTTAGGCGCAAAAAAACTAGACCAATGAG 6296 Query 272 CTATTACGCACTCTTTCAAGGATGGCTGCTTCCAAGCCAACCTCCTGGTTGTCTACGCAA 331 ||||||||| ||||| ||||||||||||||||||||| |||| || |||| Sbjct 6295 CTATTACGCTTTCTTTAAAGGATGGCTGCTTCCAAGCCTACCTGTTGATTGTAATTATTT 6236 Query 332 CTCCACATCCTTTCCCACTGAG-TCACCACTTAGGGGCCTTAGCTGAT-GATCTGGGCTG 389 | ||| |||||| |||| || | | |||| | ||||||| ||| |||||||||| Sbjct 6235 TTTCACTTCCTTTTTCACTTAGAATATTATTTAGAGACCTTAGC-GATCAATCTGGGCTG 6177 Query 390 TTTCCCTCT 398 ||||||||| Sbjct 6176 TTTCCCTCT 6168 >seq13665 Length=1045 Score = 107 bits (118), Expect = 5e-21 Identities = 112/145 (77%), Gaps = 3/145 (2%) Strand=Plus/Minus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTCCT 317 || ||| |||||||| ||||||||||||| || || ||||||||||||||||||| |||| Sbjct 879 CTCGACTAGTGAGCTGTTACGCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCT 820 Query 318 GGTTGTCTACGCAACTCCACATCCTT--TCCCACTGAGTCACCACTTAGGGGCCTTAGCT 375 | ||||| |||| || || || | | ||| | |||| ||| |||||||| Sbjct 819 AGCTGTCTGTGCAATCGGACCTCGTTAGTTCAACTTAACTGTAACTTGGGGACCTTAGCT 760 Query 376 GATGATCTGGGCTGTTTCCCTCTCG 400 |||| |||||| | ||||||||||| Sbjct 759 GATGGTCTGGGTTCTTTCCCTCTCG 735 >seq22240 Length=588 Score = 102 bits (112), Expect = 2e-19 Identities = 200/289 (69%), Gaps = 15/289 (5%) Strand=Plus/Plus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| |||||||||||||||| ||| ||||||| | | || ||| | | Sbjct 302 CGACTACGCCTTTCGGCCTCGCCTTAGGGGCCGGCTCACCCTGCGTGGATTAACCTTGCG 361 Query 61 CTGGAACCCTTGGATAATCGGCGGACGGGATTCCCAC-CCGTCACACGCTACTCATGCCT 119 | |||||||||||| |||||| | | ||| ||| | | ||||||||||| | Sbjct 362 CAGGAACCCTTGGACTTTCGGCGAGAGTGTTTCTCACACTCTTTGTCGCTACTCATGTCA 421 Query 120 GCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTC-ACCACTGACACG 178 |||||| |||| | | ||||| || | || | || |||| || | || Sbjct 422 GCATTCGCACTTCCGATACCTCCAGCATGC-CTCGCGACACACCTTCGACGGCCTACGGA 480 Query 179 ACGCTCCCCTACC---CAACCACACAGGTTG---CCACAGCTTCGGCGGATAACTTAAGC 232 ||||||| ||||| ||| | | | ||| || ||||||||| || | ||||||| Sbjct 481 ACGCTCCGCTACCGCTCAATCTTGC-GATTGAACCCGCAGCTTCGGTGGGTGGCTTAAGC 539 Query 233 CCCGCTACATTATCGGCG-----CGGAATCACTTGACCAGTGAGCTATT 276 |||| |||||| |||||| ||| | || ||||||||||||||| Sbjct 540 CCCGTTACATTTTCGGCGCAGGCCGGCTTATCTAGACCAGTGAGCTATT 588 >seq12131 Length=1185 Score = 102 bits (112), Expect = 2e-19 Identities = 111/145 (77%), Gaps = 3/145 (2%) Strand=Plus/Minus Query 259 CTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA-TGGCTGCTTCCAAGCCAACCTCCT 317 || ||| |||||||| ||||||||||||| || || ||||||||||||||||||| |||| Sbjct 757 CTCGACTAGTGAGCTGTTACGCACTCTTTAAATGAATGGCTGCTTCCAAGCCAACATCCT 698 Query 318 GGTTGTCTACGCAACTCCACATCCTT--TCCCACTGAGTCACCACTTAGGGGCCTTAGCT 375 | |||| | ||| || || | || | | ||| || | || ||| |||||||| Sbjct 697 AGCTGTCAATGCAGTTCAACCGCGTTGCTTCAACTTAGCATATATTTGGGGACCTTAGCT 638 Query 376 GATGATCTGGGCTGTTTCCCTCTCG 400 | || |||||| | ||||||||||| Sbjct 637 GTTGGTCTGGGTTCTTTCCCTCTCG 613 >seq23150 Length=555 Score = 78.8 bits (86), Expect = 2e-12 Identities = 182/262 (69%), Gaps = 17/262 (6%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAACTTGACC 60 ||||||||||| || ||||||||||||| |||||| |||| | | || | | | Sbjct 267 CGACTACGCCTTTCTGCCTCGCCTTAGGGGCCGACTAACCCTGTCCCGATTAGCGTTGGA 208 Query 61 CTGGAACCCTTGGATAAT-CGGCGGACGGGA----TTCCCACCCGTCACACGCTACTCAT 115 | ||||||||| ||| | |||||| |||| ||| | ||| | | || ||||||| Sbjct 207 CAGGAACCCTT-GATCTTCCGGCGG--GGGAGTTTTTCACTCCCCTTA-TCGTTACTCAT 152 Query 116 GCCTGCATTCTCAC-TCGCATCAACTCCACCACACAGTCACCCGGCAGCTTC-ACCACTG 173 | | |||||| ||| || || | ||||| || | || | || |||| || || Sbjct 151 GTCAGCATTCGCACTTCTGAT-ACCTCCAGCATGC-TTCTCAACACACCTTCGACGGCTT 94 Query 174 ACACGACGCTCCCCTACCCAAC-CACACAG---GTTGCCACAGCTTCGGCGGATAACTTA 229 ||| |||||||||||||| || ||| || | ||| ||||||||| | || || Sbjct 93 ACAGAACGCTCCCCTACCCCACATACAAAGTATGCAGCCGCAGCTTCGGTTGCTAGTTTT 34 Query 230 AGCCCCGCTACATTATCGGCGC 251 ||||||| ||||| || |||| Sbjct 33 AGCCCCGTTACATCTTCCGCGC 12 >seq24174 Length=521 Score = 73.4 bits (80), Expect = 9e-11 Identities = 199/296 (67%), Gaps = 8/296 (3%) Strand=Plus/Minus Query 1 CGACTACGCCTGTCGGCCTCGCCTTAGGACCCGACTCACCCAGGGCAGACAAAC-TTGAC 59 || || ||||| ||||| || ||||||| ||||||| |||| | | || | | |||| Sbjct 294 CGGCTGCGCCTTTCGGCTTCACCTTAGGCCCCGACTAACCCTGATCCGATTAGCGTTGAT 235 Query 60 CCTGGAACCCTTGGATAATCGGCGGACGGGATTCCCACCCGTCACA-CGCTACTCATGCC 118 | |||| |||| |||| || |||| ||| | |||| | | || |||| ||||| Sbjct 234 CA-GGAAACCTTATCCTTTCGGTGGGCGGGTTTCTCGCCCGCCTTATCGTTACTTATGCC 176 Query 119 TGCATTCTCACTCGCATCAACTCCACCACACAGTCACCCGGCAGCTTCACCACTGACACG 178 | |||| | | || |||||| ||| || | ||| | | |||||| | | Sbjct 175 TACATTTGCTTTTCTATACACTCCAGCACCCATT-ACCAGATACCTTCACTGTATATAGA 117 Query 179 ACGCTCCCCTACCCAACCACA-CAGGTTGCCACAGCTTCGGCGGATAACTTAAGCCCCGC 237 | ||||||||||| | | || | ||| |||||||| | | || || | |||| Sbjct 116 ATGCTCCCCTACCGATATATTTCAA--TCCCATAGCTTCGGTGTACAATTTTATGCCCGT 59 Query 238 TACATTATCGGCGCGGAATCACTTGACCAGTGAGCTATTACGCACTCTTTCAAGGA 293 | |||||| || ||| || ||| |||||||| ||||||||||||| || || Sbjct 58 TT-ATTATCCATGCCCGATCGCTCGACTAGTGAGCTGTTACGCACTCTTTAAATGA 4 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1177181492736