Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01001951.1 Length=416 Score E Sequences producing significant alignments: (Bits) Value seq22912 288 2e-75 >seq22912 Length=564 Score = 288 bits (318), Expect = 2e-75 Identities = 312/414 (75%), Gaps = 0/414 (0%) Strand=Plus/Plus Query 3 CATCCCAACGCCATGACCCAGGTGGTGTTTGGCGAAAACGGCGAGCTGCACCGCGACACC 62 || |||||||||||||||| | | | ||||| | |||||| |||||||||||||| Sbjct 72 CACCCCAACGCCATGACCCTGATTGCCGAAGGCGAGCAGGGCGAGTTGCACCGCGACACC 131 Query 63 TATTACTCGGTGGGTGGCGGTTTCGTGGTGGATGAAGCCCAGGCCCAAAGCGGTGTGGCG 122 |||||||||||||| ||||| || ||||| |||| |||||| ||| ||||||||| | Sbjct 132 TATTACTCGGTGGGCGGCGGCTTTGTGGTCGATGCAGCCCAAGCCGCCAGCGGTGTGTTG 191 Query 123 GACATGGACCGTACCGAGCTGCCCTATGATTTTTCCAGTGCCGTGGAGCTGTTGCAGCTG 182 || |||| || | | |||| || || || ||| |||| || ||| ||| ||| Sbjct 192 GATGCTGACCAGACGGTGTTGCCGTACGACTTCAACAGCGCCGCCGAACTGCTGCGCCTG 251 Query 183 TGCAAGACCCACAACCTGCGCGTTGCCGAACTGATGCTGGCGAATGAAAAAACCTGGCGC 242 |||||| || |||| |||| | || ||||| |||| || || || ||||||| Sbjct 252 TGCAAGCAAAACGACCTCAGCGTGTCGCAATTGATGATGGCCAACGAGAAGGTCTGGCGC 311 Query 243 AGCGAAGAAGAAATCCGCAGCGGCCTGATGAAACTCTGGCGCGCCATGCAGGATTGCGTG 302 ||||| ||||| |||||| |||||| || |||||| ||||||||||| ||||| Sbjct 312 AGCGAGGAAGACATCCGCGCTGGCCTGTACAAGCTCTGGGAAGCCATGCAGGAATGCGTC 371 Query 303 GAGCAGGGCCTCAAGCACGAAGGTATCCTGCCCGGCGGCTTGAACGTGCGCCGTCGCGCT 362 | | ||||||||| |||| || | || |||||||| ||||||||||||| ||||| Sbjct 372 AACAACGGCCTCAAGTACGAGGGCACGCTACCCGGCGGGCTGAACGTGCGCCGGCGCGCC 431 Query 363 GCCAAGTTACACCGCAGCTTGCAGGAGCTGAACAAGCCCAATGTGATCGGCTCG 416 |||||| | ||||||||| ||||||| | ||||||||| |||||||||||| Sbjct 432 GCCAAGCTGCACCGCAGCCTGCAGGAAATTGGCAAGCCCAACGTGATCGGCTCG 485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1228363296768