Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pseudoperonospora_20cubensis_20[genbank_20GCA_5F000252605.1_202012- 03-13] 35,539 sequences; 64,332,776 total letters Query= AAMG01002205.1 Length=300 Score E Sequences producing significant alignments: (Bits) Value seq18352 95.1 2e-17 >seq18352 Length=750 Score = 95.1 bits (104), Expect = 2e-17 Identities = 89/112 (79%), Gaps = 1/112 (1%) Strand=Plus/Plus Query 24 TTCGATCACGTCATGCAGCATCGCGGCCATCAGGCTCTGAAGGTCCATGTGCACGTCGGC 83 ||||||||| || |||||||| || ||||||||||| ||| |||||||||||| |||||| Sbjct 638 TTCGATCACATCGTGCAGCATGGCCGCCATCAGGCTTTGATGGTCCATGTGCATGTCGGC 697 Query 84 AAGAATATTCGGCCACCGCAAGAGGATGGGTGACATACGCCTCGCCACTACG 135 ||| || | |||||| || || || || || || || | ||| || || || Sbjct 698 AAGGATGCT-GGCCACGGCCAGCGGGTGCGTCACGTAGGGCTCACCGCTGCG 748 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 857295217536