Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01000190.1 Length=117 Score E Sequences producing significant alignments: (Bits) Value seq8696 107 1e-21 seq6830 77.0 2e-12 >seq8696 Length=1539 Score = 107 bits (118), Expect = 1e-21 Identities = 94/117 (80%), Gaps = 0/117 (0%) Strand=Plus/Minus Query 1 GAACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGTCAAAATGATAACATCGCCC 60 ||||||||||||||||||||||| || ||||| || |||| | ||| | || Sbjct 832 GAACCCAAAGACTTTGATTTCTCATACGGTGCTGACAAGGTCATTTAAAAAACGACTGCC 773 Query 61 GATCCCTAGTCGGCATAGTTTACGGTTAAGACTACGACGGTATCTGATCGTCTTCGA 117 ||||| ||||||||||||||| |||||||||||||| ||||||| ||| ||||||| Sbjct 772 AATCCCGAGTCGGCATAGTTTATGGTTAAGACTACGATGGTATCTAATCATCTTCGA 716 >seq6830 Length=5062 Score = 77.0 bits (84), Expect = 2e-12 Identities = 75/94 (80%), Gaps = 2/94 (2%) Strand=Plus/Minus Query 3 ACCCAAAGACTTTGATTTCTCGTAAGGTGCCGAGCGAGT-CAAAATGATAACATCGCCCG 61 ||||||||||||||||||||| || ||||| || | ||| || | | ||| | || Sbjct 2455 ACCCAAAGACTTTGATTTCTCATACGGTGCTGA-CAAGTTCATTTTAAAAACGACTGCCA 2397 Query 62 ATCCCTAGTCGGCATAGTTTACGGTTAAGACTAC 95 ||||| |||||| |||||||| |||||||||||| Sbjct 2396 ATCCCGAGTCGGTATAGTTTATGGTTAAGACTAC 2363 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 278376530880