Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01000811.1 Length=502 Score E Sequences producing significant alignments: (Bits) Value seq5795 271 2e-70 seq7166 116 1e-23 >seq5795 Length=3727 Score = 271 bits (300), Expect = 2e-70 Identities = 361/499 (72%), Gaps = 37/499 (7%) Strand=Plus/Minus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| | |||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1021 CGCAAGATCGAAATTCAAAGGAATTGACGGGAGCCTACACAAGCGGTGGAGCATGTGGTT 962 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG-ACATCCTCTGACCCCTCTAGAG 125 |||||||| ||||| ||||||||||||| ||||| | || | || Sbjct 961 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTGCAAAT-----------TTTA-TT 914 Query 126 ATAGAGGTTTCCCCTTCGGGGGACAGAGTGACAGGTGATGCATGGTTGTCGTCAGCTCGT 185 ||| | ||| | | ||||| | ||||||| |||||||||||||| Sbjct 913 ATAAAATTTT-----------ATAATAAAAACAGGCGTTGCATGGCTGTCGTCAGCTCGT 865 Query 186 GTCGTGAGATGTTGGGTTAAGTCCCGCAACGAGCGCAACCCTTAAGCTTAGTTGCCA--T 243 || |||| ||||| |||||| ||| |||||||||||||| || |||||||| | | Sbjct 864 GTTGTGAAATGTTTGGTTAAATCCTTTAACGAGCGCAACCCCTATTGTTAGTTGCTATTT 805 Query 244 CATTAAGTT------GGGCACTCTAAGTTGACTGCCGGTGACAAACCGGAGGAAGGTGGG 297 ||| | || ||||||||| | || | ||| | | |||||||| || Sbjct 804 TATTTATTTAAATAAAAGCACTCTAATAAAAATGTCAATGATAGGTTGAAGGAAGGTAGG 745 Query 298 GACGACGTCAAATCATCATGCCCCTTATGATTTGGGCTACACACGTGCTACAATGGACAA 357 || |||||||| || ||||| ||||||||| |||||||||||||||||||||||| | Sbjct 744 GATGACGTCAAGTCTTCATGGCCCTTATGAGTTGGGCTACACACGTGCTACAATGATAAT 685 Query 358 TACAAAGGGCAGC--GAA--ACCGCGAGGTCAAGCAAATCCCATAAAGTTGTTCTCAGTT 413 ||||| | | || ||| | | | ||||||| | |||| | ||| |||| Sbjct 684 TACAATGAGAGGCAAGAATGATAAAAAATTGGAGCAAAT-CTTTAAAAATTATCTTAGTT 626 Query 414 CGGATTGTAGTCTGCAACTCGACTATATGAAGCTGGAATCGCTAGTAATCGTAGATCAGC 473 |||||| | | |||||||||| | |||||||| |||||||||||||||||| ||| |||| Sbjct 625 CGGATTATGGGCTGCAACTCGCCCATATGAAGTTGGAATCGCTAGTAATCGCAGAACAGC 566 Query 474 ATGCTACGGTGAATACGTT 492 ||||| ||||||||| ||| Sbjct 565 ATGCTGCGGTGAATATGTT 547 >seq7166 Length=1408 Score = 116 bits (128), Expect = 1e-23 Identities = 84/97 (87%), Gaps = 0/97 (0%) Strand=Plus/Plus Query 7 CGCAAGGTTGAAACTCAAAGGAATTGACGGGGACCCGCACAAGCGGTGGAGCATGTGGTT 66 |||||| | |||| ||||||||||||||||| || ||||||||||||||||||||||| Sbjct 1302 CGCAAGATCGAAATTCAAAGGAATTGACGGGAGCCTACACAAGCGGTGGAGCATGTGGTT 1361 Query 67 TAATTCGAAGCAACGCGAAGAACCTTACCAAATCTTG 103 |||||||| ||||| ||||||||||||| ||||| Sbjct 1362 TAATTCGATAATACGCGCAGAACCTTACCAACTCTTG 1398 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1503864760320