Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01001178.1 Length=367 Score E Sequences producing significant alignments: (Bits) Value seq7166 140 7e-31 seq5795 140 7e-31 >seq7166 Length=1408 Score = 140 bits (154), Expect = 7e-31 Identities = 153/196 (78%), Gaps = 7/196 (4%) Strand=Plus/Minus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| || |||| |||||||| |||||||| |||||||||| |||||| Sbjct 851 CCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCC 794 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 ||||||||||| | ||| ||| |||||||||||| ||| |||| |||||||| || Sbjct 793 CACTGCTGCCTTTAAAAA-AGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCT 735 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT--ACCTCACCAACTAGCTAATC 194 ||| ||||| || ||| |||| |||||| || | || | || |||||||| |||||| Sbjct 734 TTCAAACCAGCTAAAGATAGTCGGCTTGGT-AGTCTTTTAAACT-ACCAACTACCTAATC 677 Query 195 CGACCTAGGCTCATCT 210 || | ||||||| Sbjct 676 TTACGCAAACTCATCT 661 >seq5795 Length=3727 Score = 140 bits (154), Expect = 7e-31 Identities = 153/196 (78%), Gaps = 7/196 (4%) Strand=Plus/Plus Query 17 CCTTCTTTCACACACGCGGCATTGGCTGGATCAGGCTTTCGCCCATTGTCCAATATTCCC 76 ||||||| ||| ||| || |||| |||||||| |||||||| |||||||||| |||||| Sbjct 1472 CCTTCTT-CACTCACTTGGTATTG-CTGGATCAAGCTTTCGCTCATTGTCCAAAATTCCC 1529 Query 77 CACTGCTGCCTCCCGTAGGAGTCTGGACCGTGTCTCAGTTCCAGTGTGACTGATCATCCT 136 ||||||||||| | ||| ||| |||||||||||| ||| |||| |||||||| || Sbjct 1530 CACTGCTGCCTTTAAAAA-AGTTTGGGCCGTGTCTCAGTCCCAATGTGGCTGATCATTCT 1588 Query 137 CTCAGACCAGTTACGGATCGTCGCCTTGGTGAGCCATT--ACCTCACCAACTAGCTAATC 194 ||| ||||| || ||| |||| |||||| || | || | || |||||||| |||||| Sbjct 1589 TTCAAACCAGCTAAAGATAGTCGGCTTGGT-AGTCTTTTAAACT-ACCAACTACCTAATC 1646 Query 195 CGACCTAGGCTCATCT 210 || | ||||||| Sbjct 1647 TTACGCAAACTCATCT 1662 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1071903605760