Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01001291.1 Length=420 Score E Sequences producing significant alignments: (Bits) Value seq5957 87.8 4e-15 >seq5957 Length=1380 Score = 87.8 bits (96), Expect = 4e-15 Identities = 239/348 (69%), Gaps = 21/348 (6%) Strand=Plus/Plus Query 46 GTTCGGTCCTCCAGTTAGTAGTTACCCAACCTTTCAACCTGCCCATAGGATAGATCGCCC 105 ||||| ||||||| |||| ||||| | |||||| ||| ||| || |||||| | | Sbjct 695 GTTCGATCCTCCAAATAGTT-TTACCTATT-TTTCAATCTGTTCAT-GGTTAGATCACTC 751 Query 106 GGTTTTCGGGTCTATTTCCCAGCGACTAGACGCCCTAGTAAGACTCGCTTTTCGCTACGC 165 ||||| ||||||| || | |||| | | | ||| ||| | | || |||||| Sbjct 752 GGTTT-CGGGTCTTATTTTTATA-ACTAAAAAGCATTTTAAAACTTG-TGTTATCTACGC 808 Query 166 CTCCCCTATTCGGTTAAGCTTTGCCACTGAAAATAAG-TCGCTGACCCATTATACAAAAG 224 || | ||| |||||||| || | | ||||||| | |||| |||||||| |||||| Sbjct 809 CTACTTTATAAAATTAAGCTT-GCTA-TAAAAATAAACTTGCTGGCCCATTATGCAAAAG 866 Query 225 GTACGCAGTCACCC-AACAAAGTGGGCTCCCACTGCTTGTACGCATACGGTTTCAGGATC 283 |||| | ||||| || ||| | ||| | || || | ||| ||||||| || Sbjct 867 GTACACTGTCACTTTAATAAAAAGT--TCCAATTGATTATTAACATTAAGTTTCAGAAT- 923 Query 284 TATTTCACTCCCCTCTCCGGGGTTCTTTT-CGCCTTTCCCTCACGGTACTAGTTCACTAT 342 ||||||| | || |||||||| | ||||||| | || ||||| ||||||||| Sbjct 924 TATTTCAAAC-----TCGAAAGTTCTTTTTCACCTTTCCTTTACAGTACTTGTTCACTAT 978 Query 343 CGGTCAGTCAGTAGTATTTAGCCTTGGAGGATGGTCCCCCCATATTCA 390 |||||| | | | || || || |||| |||| |||| || |||| Sbjct 979 CGGTCATTAATTCTTA--AAGGTTTTGAGGGTGGTTCCCCAATTTTCA 1024 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1241488355328