Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01001844.1 Length=290 Score E Sequences producing significant alignments: (Bits) Value seq7166 80.6 4e-13 seq5795 80.6 4e-13 >seq7166 Length=1408 Score = 80.6 bits (88), Expect = 4e-13 Identities = 82/105 (78%), Gaps = 3/105 (3%) Strand=Plus/Minus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| |||||||| || ||| | |||| |||| ||| ||| | ||||||||| Sbjct 999 CCACCTACAAACCCTTTACGCCTAATCATTCCGAATAATGCTCGCCCCTCCCGTATTACC 940 Query 248 GCGGCTGCTGGCAC--GTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||| ||| ||||||| | ||| ||| | | ||| Sbjct 939 GCGGCTGCTGGCACGGGTA-TTAGCCGGGACTTCTTCTTTAAGTA 896 >seq5795 Length=3727 Score = 80.6 bits (88), Expect = 4e-13 Identities = 82/105 (78%), Gaps = 3/105 (3%) Strand=Plus/Plus Query 188 CCGCCTACACGCCCTTTACACCCAATAAATCCGGATAACGCTTGCCACCTACGTATTACC 247 || |||||| |||||||| || ||| | |||| |||| ||| ||| | ||||||||| Sbjct 1324 CCACCTACAAACCCTTTACGCCTAATCATTCCGAATAATGCTCGCCCCTCCCGTATTACC 1383 Query 248 GCGGCTGCTGGCAC--GTAGTTAGCCGTGGCTTATTCCTCAGGTA 290 |||||||||||||| ||| ||||||| | ||| ||| | | ||| Sbjct 1384 GCGGCTGCTGGCACGGGTA-TTAGCCGGGACTTCTTCTTTAAGTA 1427 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 828727803232