Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Pythium_20insidiosum_20[genbank_20GCA_5F000764265.1_202014-10-06] 8,992 sequences; 45,609,708 total letters Query= AAMG01002183.1 Length=408 Score E Sequences producing significant alignments: (Bits) Value seq7166 179 9e-43 seq5795 179 9e-43 >seq7166 Length=1408 Score = 179 bits (198), Expect = 9e-43 Identities = 248/341 (73%), Gaps = 6/341 (2%) Strand=Plus/Plus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGG 58 ||||| | || |||| ||||||||| ||| ||||||||||||||||||||||| ||| Sbjct 896 TACTTAAAGAAGAAGTCCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGG 954 Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||| |||| |||||| | | |||||||||||| ||||||||||| |||||| | Sbjct 955 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGTTGAAA 1014 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT-GCAGG 177 | | || ||||||| | | ||| |||||| | || |||| | Sbjct 1015 AAAACAAATTAAAGCTCAACTTTATAAATTTTTTCAAAACTGAAAAACTTGAGTATAAAT 1074 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || | ||||||| ||| || || | | |||| || |||| ||| ||||| | | Sbjct 1075 AGAGGATAATGGAATTTCTATTGGAGGGATAAAATATGTTGATAATAGAAGGAAGATCGA 1134 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 |||||||| | |||| | || |||||||||||| ||||||| |||||||| | Sbjct 1135 GAGCGAAGGCAATTATCTGG-GTATATACTGACACTGAGAAACGAAAGCTTGGGGAGCGA 1193 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 || |||||||| |||| ||||||||| || ||||||||||| Sbjct 1194 ACGGGATTAGAGACCCCGGTAGTCCATGCTGTAAACGATGA 1234 >seq5795 Length=3727 Score = 179 bits (198), Expect = 9e-43 Identities = 248/341 (73%), Gaps = 6/341 (2%) Strand=Plus/Minus Query 1 TACTTGAGGAGGAAGCCCCGGCTAACTAC--GTGCCAGCAGCCGCGGTAATACGTAGGGG 58 ||||| | || |||| ||||||||| ||| ||||||||||||||||||||||| ||| Sbjct 1427 TACTTAAAGAAGAAGTCCCGGCTAA-TACCCGTGCCAGCAGCCGCGGTAATACGGGAGGG 1369 Query 59 GCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAG 118 || ||| |||| |||||| | | |||||||||||| ||||||||||| |||||| | Sbjct 1368 GCGAGCATTATTCGGAATGATTAGGCGTAAAGGGTTTGTAGGTGGTTTTTTAAGTTGAAA 1309 Query 119 GTGAAAGGCTATGGCTCAACCCCGGGACTGCTTTTGAAACTGCAGGGCTAGAGT-GCAGG 177 | | || ||||||| | | ||| |||||| | || |||| | Sbjct 1308 AAAACAAATTAAAGCTCAACTTTATAAATTTTTTCAAAACTGAAAAACTTGAGTATAAAT 1249 Query 178 AGGGGCAAGTGGAATTCCTAGTGTAGCGGTGAAATGCGTAGATATTAGGAGGAACACCAG 237 || || | ||||||| ||| || || | | |||| || |||| ||| ||||| | | Sbjct 1248 AGAGGATAATGGAATTTCTATTGGAGGGATAAAATATGTTGATAATAGAAGGAAGATCGA 1189 Query 238 TGGCGAAGGCGGCTTGCTGGACTGTA-ACTGACACTGAGGCTCGAAAGCGTGGGGAGCAA 296 |||||||| | |||| | || |||||||||||| ||||||| |||||||| | Sbjct 1188 GAGCGAAGGCAATTATCTGG-GTATATACTGACACTGAGAAACGAAAGCTTGGGGAGCGA 1130 Query 297 ACAGGATTAGATACCCTGGTAGTCCACGCCGTAAACGATGA 337 || |||||||| |||| ||||||||| || ||||||||||| Sbjct 1129 ACGGGATTAGAGACCCCGGTAGTCCATGCTGTAAACGATGA 1089 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203091808256